Dehalobacter restrictus: DEHRE_09480
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Entry
DEHRE_09480 CDS
T02996
Name
(GenBank) RNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
drs
Dehalobacter restrictus
Brite
KEGG Orthology (KO) [BR:
drs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
drs03009
]
DEHRE_09480
Enzymes [BR:
drs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
DEHRE_09480
Ribosome biogenesis [BR:
drs03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DEHRE_09480
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SUKH-3
Motif
Other DBs
NCBI-ProteinID:
AHF10286
LinkDB
All DBs
Position
complement(1883680..1884438)
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AA seq
252 aa
AA seq
DB search
MDCSGDQSERLQKAMARLGVASRRHAEILISQGLVKVNGQTVTQPGFKVTPEDVIEVNAK
TYSSGPSEDLVYVMLYKPAGVITSVTDPHQRKTVIDLLGQNIKERVYPVGRLDYDTSGLL
LLTNDGELTFRLTHPSFGVEKVYRASVAGNISDQAIRTLESGVHLEDGMTSPAKIKKLSR
YKSGNQTEIELAIHEGKNRQVRRMLEQVGYPVFRLRRICFGPLQLDPKMTAGEYRLLTTS
EVNALKEAVSIR
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggattgttccggagatcaatctgaacgtttgcaaaaagcgatggctcgtttgggcgtc
gcttctcggcgtcatgccgaaattctgatcagtcagggacttgtaaaagtgaatggacag
accgtaacgcagccgggttttaaggtaacgcctgaggatgtcatcgaagtcaacgctaag
acgtattcttcaggaccaagcgaagacctggtctacgtcatgctttataaacctgcgggt
gttattacaagtgttacggacccccatcaaaggaaaacggtcattgatttacttggccaa
aatattaaagaaagagtctatccggtcggcagactggattatgacacttcaggacttctg
cttctgaccaatgacggggaacttacatttcggctgacgcatccaagttttggcgtggaa
aaagtataccgggcctcagtcgccggtaatatttctgatcaggcaatcaggacgcttgag
tcgggtgtacacctcgaggatggtatgacttctcctgcgaaaattaagaagctttcccgt
tataaaagcggcaaccagaccgaaattgagcttgccattcacgaaggaaagaacaggcag
gtcaggagaatgcttgagcaggtcggataccccgtttttcgcttgcgcagaatctgtttt
ggcccgctccagctggatccaaaaatgacggcaggagaataccgactgttaacgacttct
gaagtcaatgctttgaaggaagcagtaagtatacggtga
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