Desulfohalobium retbaense: Dret_1752
Help
Entry
Dret_1752 CDS
T00989
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
drt
Desulfohalobium retbaense
Pathway
drt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
drt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dret_1752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
drt03019
]
Dret_1752
03009 Ribosome biogenesis [BR:
drt03009
]
Dret_1752
Enzymes [BR:
drt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Dret_1752
Messenger RNA biogenesis [BR:
drt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Dret_1752
Ribosome biogenesis [BR:
drt03009
]
Prokaryotic type
rRNA helicases
Dret_1752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
ACV69036
UniProt:
C8X3N9
LinkDB
All DBs
Position
2016677..2018170
Genome browser
AA seq
497 aa
AA seq
DB search
MTDQYASNASQSKHEYSATSLEDLSPRIQEACRSAGWSSLAPVQARSIPVLLRGDDLMVQ
SRTGSGKTGAFLLPMLERLNPDQAACQALILVPTRELARQVHAEAQTLFKGSGLRTAAVF
GGVGYKEQFDALREGAHVVVGTPGRILDHLLKGSFATKKLRILVMDEADRMLSMGFYQDM
VQIRGYLPQSVESSYLFSATFPSHVLRLSSQFLIDPGFLSLSSDTLNVAEIEHSYYVVPA
VQRERSLLRILEYLNPVSALIFCNTKSDVQFVTTVLQRFGLDADQLTSDLRQNKRDQVLG
RIKAGNLRLLVATDVAARGIDIPDLSHVIQYQPSEDPELYVHRAGRTGRAGASGEAVTLV
AGMEKIKLNQVAKKFRIPLQEQELPSEETVNDMVGQRLTAILEAELRSRDLVQQERAKRF
VKLARELGQNDDAAMLLGMLLDEAAQKASQGPAAPSEEEPPSEPKQDKPKANKKRRRPRR
KKTRQSSDNDSNSSQGN
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatcaatacgcctcgaacgcttcccagtccaaacacgaatattccgccacctcg
ctggaggacctttctccgcgcatacaagaggcttgccgctcagccggctggtccagcttg
gctccggtgcaggccagaagcataccggttctgctgcgcggtgacgacctcatggtccaa
tcccggaccggcagcggcaagaccggagcctttctcctgcccatgctggaacgcctgaac
ccggatcaagccgcctgtcaggccttgatcctcgtccccactcgggaactggcccggcag
gtccacgccgaggcccagacgttattcaagggttcaggacttcgcacagccgctgtcttt
ggcggagttggctataaagaacaattcgacgctctgcgtgaaggcgcccatgtcgttgta
ggcaccccggggcggatcctcgaccacctgctcaaaggcagtttcgccaccaaaaaactg
cgtatcctggtcatggacgaagccgatcggatgttatccatggggttttaccaggacatg
gtccagatccggggctatcttccgcaatccgttgaaagcagctacctcttctctgccaca
tttccctctcacgtcctgcgcctgtcgagtcagtttctgatcgatcccggttttttgagc
ctcagcagcgacaccctcaacgtcgcagagatcgagcattcctactatgtggttcccgcg
gtgcagcgcgaacggagcctgctgcgcattctggaatatctcaatccggtttcggcgctt
attttctgcaatacgaaaagtgatgttcaattcgtgaccacggtcctgcaacgttttggc
ctcgacgcggaccagttgacctcggacctgcgacaaaacaaacgcgaccaggtccttgga
cgcatcaaggccggaaacctgcgtcttctcgtggccacggatgtcgctgcccgggggatc
gacatccccgatctttcccatgtcatccagtaccagccttcggaagaccccgaactctat
gtccaccgggctgggcggaccggacgtgctggcgccagcggcgaggcggtgaccctcgtg
gccgggatggagaagatcaagctcaatcaggtcgccaaaaaattccgcatcccgctgcag
gagcaggaactgccttcggaggaaacagtcaacgatatggtcgggcaacggttgaccgct
atcctcgaagctgaactccgctcccgtgatcttgtccagcaggaacgcgccaagcgattt
gtcaaactcgccagagaactgggccaaaacgacgacgccgccatgttgctgggcatgctc
cttgacgaagcagcgcaaaaagcaagccaggggccagccgcaccaagcgaagaggaacct
ccttccgagccaaagcaggacaagcccaaagccaacaagaaacggcggcggcctcgccgg
aaaaaaactcgccagtcctccgataacgacagcaattcctcgcagggcaactga
DBGET
integrated database retrieval system
