Desulforamulus ruminis: Desru_0281
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Entry
Desru_0281 CDS
T01518
Name
(GenBank) RNA polymerase sigma-H factor
KO
K27000
RNA polymerase sigma-H factor
Organism
dru
Desulforamulus ruminis
Brite
KEGG Orthology (KO) [BR:
dru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dru03021
]
Desru_0281
Transcription machinery [BR:
dru03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Desru_0281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
HTH_16
GerE
HTH_23
HTH_38
HTH_36
HTH_30
Sigma70_ECF
DUF1676
Topo-VIb_trans
Motif
Other DBs
NCBI-ProteinID:
AEG58578
UniProt:
F6DNN8
LinkDB
All DBs
Position
284514..285164
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AA seq
216 aa
AA seq
DB search
MDLNSNAQREVSGGYQVMVDEDVVEFAREGDDAALEYLINKYKNFVRAKARSYFLIGADR
EDIIQEGMIGLYKAIRDFRMDKLSSFRAFAELCITRQIITAIKTATRQKHIPLNSYVSLN
KPIYDEDSDRTLLDVISGSKITDPEELIISREEFDDIEEKMGEILSSLEWKVLMSYLEGK
SYQEIAEDLKRHVKSIDNALQRVKRKLERYLEKREV
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggatttgaattcaaatgcacaaagggaagtttccggaggctaccaggtaatggttgat
gaagatgtcgtcgagtttgctcgtgaaggtgacgatgcggccctggagtacttgattaac
aagtataaaaactttgtgcgtgccaaagcccgctcgtattttctgatcggcgcagataga
gaagatattatccaggaaggcatgatcggtttatataaagccattcgtgattttagaatg
gacaaattatcttccttccgggcttttgcggaactatgtatcacccggcaaatcattacc
gccatcaaaaccgccacccggcaaaagcatatccctttaaattcttatgtctcattaaac
aaacccatttacgacgaggattcggatcgtaccctgctggatgtaatctccggttctaaa
attaccgaccctgaggaactgattatcagcagggaagaatttgacgacattgaagaaaaa
atgggtgaaattctaagctccctggaatggaaagttttaatgtcctacctggaagggaag
tcctaccaggaaattgccgaagatctgaagcgccatgtcaagtccattgataatgcgctg
caaagggtcaaacgaaagcttgagagatacctggaaaaacgagaagtataa
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