Desulfolutivibrio sulfodismutans: GD606_12935
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Entry
GD606_12935 CDS
T06784
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
dsd
Desulfolutivibrio sulfodismutans
Brite
KEGG Orthology (KO) [BR:
dsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dsd03032
]
GD606_12935 (gyrB)
03400 DNA repair and recombination proteins [BR:
dsd03400
]
GD606_12935 (gyrB)
Enzymes [BR:
dsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GD606_12935 (gyrB)
DNA replication proteins [BR:
dsd03032
]
Prokaryotic type
DNA Topoisomerases
GD606_12935 (gyrB)
DNA repair and recombination proteins [BR:
dsd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GD606_12935 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QLA13107
LinkDB
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Position
2881590..2883983
Genome browser
AA seq
797 aa
AA seq
DB search
MIQNGSDNTYNADSITVLEGLSAVRKRPAMYIGSTDLRGLHHLVYEVVDNSIDESMAGYC
DRISITIHLDNSVTISDNGRGIPVDIHPKEGKPAVEVVMTVLHAGGKFDNDAYKVSGGLH
GVGVSVVNALSEYLEVTVKRNNKRYQQRYERGIPVTSVSLIGESESTGTTVRFRADEEIF
ETLQFSHDILRKRFEELAYLNSGLEIDFRDDRNQQRETFHVEGGLSQFVRDLNSGESVIH
DIISGEGELDNVVVQFALQYNAKYKEDVLTFANNIRTREGGKHLEGFRTALTRAINTYIE
KSDLAKKYKQKLSGDDVREGLSAVISVKLPRPQFEGQTKTKLGNSEVAGIVSKIIYDSIN
VFFEENPKDAKAIVEKAVDAARAREAARKAKELVRRKGALSDHSLPGKLADCQSKNPEES
ELYIVEGDSAGGSAKQGRDPRFQAILPLRGKILNVEKTRMDKMLGNKEIRALITAMGSGI
GDDEKDISKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQYLELIDGGHIYIAQPPLYRVH
KGDFERYIKDEEEMSLFLLGRIGEDLSVQIDDKIFFGNDLTNIILQIRNLQLRISEAVSY
GIPELLLLNLLNFTRKITLEDFINNIIPYEILKYLSDKGYLVEFEELVEDDEKRNYLIFE
NSCRSRFRLGLEFFQSKVYRRAFEAFHELKNICNNFEFILSKKEEKREIHGLFELYQAVM
DEAHKGIHIQRYKGLGEMNPEQLWKTTMNPENRTFLKVNVDDLSEAGDIFSDLMGEKVEP
RREFIERNALSVRELDI
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgattcaaaatggctctgataatacatataatgctgatagtattactgtactggaagga
ctttctgccgttcgtaaacgtccggctatgtacattggatcgacagatttacgaggtctt
catcatcttgtttatgaagttgttgataactctattgatgaatccatggctggttattgt
gatagaatttcaattactattcatttggataacagtgtaactattagtgataatggccga
ggaataccagtagatattcatcctaaagaaggaaaaccagctgtcgaagttgttatgaca
gttcttcacgccggtggaaaatttgataacgatgcctataaggtttctggtggattgcat
ggtgtcggtgtttccgttgtcaatgctttatctgaatatctcgaagtcacagttaagaga
aataataaacgttatcaacaacgttatgaacgtggaattcctgtcacttctgtatcgttg
atcggtgaatctgaatcaaccggcacaactgttcgttttcgagcagatgaagaaattttt
gaaaccttacagttctctcatgatatccttagaaaacgatttgaagaattggcctattta
aatagcggccttgaaattgattttcgggatgaccggaaccaacaaagggagacctttcac
gttgaaggtgggcttagtcaatttgttcgtgatttgaattcaggcgaatctgtcatccat
gatataatttctggtgaaggtgaacttgataatgttgttgtacaatttgctttgcaatat
aatgcaaagtacaaagaagatgttttaacattcgctaataatatacgtactcgcgaaggt
ggaaaacacttagaaggtttccgtacagcgttaacacgtgcaatcaacacatacattgaa
aagtcagatctcgcaaaaaaatataagcagaaactttctggtgatgatgtccgggaaggt
ctttcagcagttatcagcgtcaaacttcctcgaccccaatttgaaggtcagactaaaact
aaacttggcaacagcgaagtagctggtattgtttcaaaaattatttatgacagcataaat
gtattttttgaagaaaatccgaaagatgccaaagcaattgttgaaaaggctgttgatgca
gcccgtgcgcgggaagcagctcggaaagccaaagaactagtccggcgcaaaggcgcatta
tccgaccattcgcttccaggtaaattggctgactgccagagtaaaaatcctgaagaaagt
gaactttacattgttgagggagattccgcaggtggttccgcaaaacagggacgcgaccct
cgtttccaagctattttaccacttcgaggaaaaattttaaatgttgaaaaaactcgaatg
gataaaatgctcggaaataaagaaattcgtgctttgattactgctatgggttcaggaatt
ggtgatgatgaaaaagatatttcaaaacttaggtaccataagattataattatgacagat
gctgatgttgatggagcacatattagaacattacttcttacttttttctttcgtcaatat
ctagaattaattgatggaggacatatttatattgctcaacctccattatatagagttcac
aagggtgatttcgaaagatacataaaagacgaagaagaaatgtctttatttcttttagga
cgtattggtgaggatctttctgtccagatcgacgacaaaatattttttgggaatgatctt
acaaatattattttgcagattcggaatctacaacttcgcatttcggaagcagtttcttat
ggtattcctgaattactattgttgaatcttttgaattttacaagaaaaattacattagaa
gattttataaataatataattccttatgaaattttaaaatatctttctgataaagggtat
ttagtagaatttgaagaactagtggaagacgatgaaaaacgaaactatttaattttcgaa
aattcctgccgttctcgttttcgtcttggtttagaatttttccaatcaaaagtttatcga
agggcatttgaagcttttcatgaattaaaaaatatttgtaataattttgaatttattttg
tctaaaaaagaagaaaaacgcgaaattcatggattattcgaattatatcaagctgttatg
gatgaagctcataaaggcattcatatacagcgttataaaggtctaggtgagatgaatcct
gaacaattatggaaaacaactatgaatccggaaaatcggacttttcttaaggttaacgtt
gatgatctttctgaagctggagatatcttttcggatcttatgggtgaaaaagttgaacca
cgaagagaatttattgaacgcaatgcactcagtgttcgtgaattagatatttag
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