KEGG   Dickeya solani IPO 2222: A4U42_15975
Entry
A4U42_15975       CDS       T04410                                 
Name
(GenBank) ClpV1 family T6SS ATPase
  KO
K11907  type VI secretion system protein VasG
Organism
dso  Dickeya solani IPO 2222
Pathway
dso03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:dso00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    A4U42_15975
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:dso02044]
    A4U42_15975
Secretion system [BR:dso02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   A4U42_15975
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 AAA_16 ClpB_D2-small AAA_22 AAA_7 NACHT TniB RsgA_GTPase nSTAND3 Ras Sigma54_activat Rootletin SLFN-g3_helicase Clp_N
Other DBs
NCBI-ProteinID: ANE76702
LinkDB
Position
3690572..3693172
AA seq 866 aa
MIRIELPILVERLNPLCRHMMEEAAALCIQHQGAEIRIEHLLLKMLETPLCDVRQIIKRA
GMDADELSALLQPNAADKGFESGYPSFSPLLVEWLQDSWLLASAELQHARLRSGVLLLVL
LMTPTRYLSATVTRQLAQINRELLRQQFDEWVKDSAETEVISAAGATPEQAAAATTQLSR
YTQNVTESARQGKLDPVLCRDHEIDLMIDILSRRRKNNPIVVGEAGVGKSALIEGLALRI
VAGLVPERLRDVELLTLDLGAMQAGASVKGEFEKRFKGVMQEVKESPKPVVLFIDEAHTL
IGAGNQAGGLDVSNLLKPALARGELRTIAATTWSEYKKYVEKDAALSRRFQLVKVGEPNV
DEATVILRGLRSIYEQSHGVLIDEEALQAAANLSARYISGRQLPDKAIDVLDTACARVAI
NLTTPPRAVSQLQTRLHQQALEIAQLERQGRIGLGDTAERLATLRDASETDAATLAQLEA
DWQRQKTLVQQIVALRTALLADEPAEDFDAAAAAAELADSERSLAELQQPSVLVSPHVDK
IQIASVIAEWTGVPLNRISQGELDVVTRLPDYLGDSIKGQQLAIAQLHKHLLTARADLRR
PGRPLGAFLLVGPSGVGKTETVVQIADLMFGGRHYLTTINMSEYQEKHTVSRLIGSPPGY
VGFGEGGVLTEAIRQKPYSVVLLDEVEKAHPDVLNLFYQAFDKGELADGEGRVIDCRNVV
FFLTSNLGFQTIVNFADRQNELLDALYPELAAFFKPALLARMEVIPYLPLGNDTLVAIVQ
GKLSRLVTLLQQRFGAEVVIDESVPEEILRLANRSENGARMLESVIDGALLPPVSLQLLQ
RMSAGQPVSRIHFQVEDGQFRSEVEG
NT seq 2601 nt   +upstreamnt  +downstreamnt
gtgattcgaatcgaactgccgatcctggttgagcgactcaacccgctgtgccgccacatg
atggaagaggcggcggcgctgtgcattcagcatcagggcgcggagatccgcattgagcac
ctgctgctgaaaatgctggagacgccgttgtgcgacgtgcgccagatcatcaaacgcgcc
gggatggatgccgacgaactgtcggcattgctgcaacccaatgccgcggataaagggttt
gagtcaggctatccctcgttttcgccgctgctggttgagtggttgcaggacagctggctg
ctggcctcggccgaactccagcacgcccggctgcgcagcggcgtgctgctgctggtgctg
ttgatgacgccgacgcgctatctgtcggccacggtaacccgccaactggctcagattaac
cgcgaactgctgcgtcagcagtttgacgaatgggtgaaagactcggcggaaaccgaggtg
atttccgccgccggcgcgacgccggagcaggcggctgcagccaccacccagctgtctcgt
tatacccagaatgtcaccgagtccgcccgtcagggcaagctggacccggtgctgtgccgc
gatcatgaaatcgacctgatgatcgacattctgtcccgtcgccgtaaaaacaacccgatc
gtggttggcgaggccggggtgggtaagagcgcgctgattgaaggactggcgctgcgcatc
gtcgccgggctggtgccggagcggctgcgtgacgtggaactgttgacgctggatttgggc
gcgatgcaggccggcgcctcagtgaaaggcgaattcgagaagcgtttcaaaggggtgatg
caggaagtcaaagagtcgccgaaaccggttgtcctgttcatcgacgaggcccacacctta
atcggcgccggcaatcaggccggtgggctggatgtgtccaacctgcttaaaccggcgctg
gcgcgcggcgaactgcgcactatcgccgccactacctggagcgaatacaagaaatacgtg
gaaaaagacgccgcgctgtcgcgtcgtttccaactggtgaaagtgggcgagccgaacgtt
gacgaagccacggtgattctgcgcgggctgcgcagtatttatgaacaatcgcacggtgtg
ttgatcgacgaagaagccctgcaggcggcggccaatctgtccgcccgttatatctccggg
cgtcagttgccggacaaagcgatcgacgtactggataccgcctgcgcacgcgtcgccatc
aacctgactacgccgccgcgcgcggtcagccagttgcagacccgtttgcatcagcaggcg
ctggaaatcgcccaactggagcgtcagggccgcatcggtcttggcgacacggcggagcgg
ctggcgacgctgcgtgacgccagcgaaacggacgccgcgacgctggcgcaactggaagcc
gactggcagcgtcaaaaaacgctggtgcagcagattgtcgccctgcgcacggcgctgctg
gccgatgaaccggcggaagatttcgatgccgccgccgcggccgcagagctggccgatagc
gagcgatcgctggccgaactgcaacaaccgtcggtgctggtgtccccgcatgtggataaa
atccagattgcgtcggtgatcgccgagtggaccggggtgccgttgaaccggatttcccag
ggcgagctggacgtggtcacccgcctgccggattacctcggcgacagtatcaaagggcaa
cagttggcgatcgcccagttgcacaaacacctgctgaccgcccgcgccgacctgcgccgt
cccggccgcccactgggcgcatttttgctggtggggccgagcggcgtgggcaagaccgaa
accgtggtgcagattgccgatctgatgttcggcggccgtcattatctcaccaccatcaac
atgtccgagtaccaggagaaacacacggtttcccgcttaatcggttcgccgccggggtat
gtcggctttggcgagggtggggtgctgaccgaggccattcgtcagaaaccctattcggtg
gtgctgctggatgaagtggaaaaagcccatccggacgtgctcaacctgttctatcaggcg
ttcgacaagggcgaactggcggacggcgaagggcgggtgatcgactgccgcaatgtagtg
ttcttcctgacctccaatctggggttccagacgattgtcaattttgcggatcggcagaac
gaactgctggatgcgctctatccggaactggcggcgttcttcaaaccggcgttgctggcg
cgcatggaagtgattccctacctgccgctggggaacgacacgctggtggcgatcgtgcag
ggcaaactgtcccgtctggtgacgttgctgcaacagcgctttggcgccgaggtggtcatc
gacgagtcggtgccggaagagattttgcgtctggcgaaccgcagcgagaacggcgcgcgc
atgctggagtcggtgatcgacggcgcactgttgccgccggtgtcgttgcaattgctgcaa
cgcatgtcggccggtcagccggttagccgcattcatttccaggtggaagacggccagttc
cggtccgaggtggagggctga

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