Dichomitus squalens: DICSQDRAFT_81480
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Entry
DICSQDRAFT_81480 CDS
T03133
Name
(RefSeq) hypothetical protein
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
dsq
Dichomitus squalens
Pathway
dsq04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
DICSQDRAFT_81480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsq04121
]
DICSQDRAFT_81480
Enzymes [BR:
dsq01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
DICSQDRAFT_81480
Ubiquitin system [BR:
dsq04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
DICSQDRAFT_81480
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RINGv
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
18844398
NCBI-ProteinID:
XP_007363094
JGI:
81480
LinkDB
All DBs
Position
Unknown
AA seq
1590 aa
AA seq
DB search
MQEDQDTCRICSAPAEPGQPLFHPCKCSGTIRYIHQDCLTEWLAHSKKKTCDVCKHPYSF
TKVYSKDMPERLPILLILRQFSHQVVSAILFALRAALVATVWLAALPWATIWTWRVYFAL
GDSAAWWISAMKRPPSELDFYLGVVANGTVANATSSDSADAQSPTPISLFVHPMYRTISS
DIFSGQIIASIIVLSFVAIFLLREWITQNARPGVFEDGDGVVDPGADALPPLPENPPPQA
QEPPVHLVPRLPPPPPPVVAEPEHDRAIPLPDSRYGRRDDYAFQARTKKPRTRGSAQASE
DSQEAGPSRVAKGKRRVHTTALEERRSLRARRRVRRTRIFEGDSSFDEGAALHDDKDFRR
LRYVAHRAEDFDEELRKRNGSSSKSEPEPEPENWPPERNHRRPRDPNQLPAFSEFTFTYP
SPSTSNGDAHSPSAGTSTNPYKEKGNGNLPASISFAPSSPRSDSDDDEDEDDEDERTPTR
PSTPVLATSSSASYDFINVEDATADVMQPSTSTAGLRRPPLPTMTLPPSPIPSSSQAALG
DTPLASPSLATYRAPEELEVPPDAEPDYFVRDYLRNLQPDRYLDPERVEEEHARYFRDPA
EQHDDDDESSDTEFDTDEETEMRRLALARSGFKEEAEAMRRARVQEMAEMADGEMDVDDE
GEAIMEETQWTDDDGLQDDDEDDDEGEPFVQLREELGGPLPGDAEDGLPGAAQDRRELRV
LGQPPELEQLPEDLDAEVNIEDDMDGALEAIGLRGPLVGVLQNAVLMTVILDTTIGLGIF
LPFIIGKSTALLTLNPRRAAQLIHLPLRLIRLVTDPIVDSVLLFFSKLVLPPLVQLCQTA
LQSGMKGIARNVGQDRADKLAELSTVAYGNLLSIASQVMDHSPPSTPSDSVVSAAKPSSS
IFYRILEEDTTLMRIAEPYFAPIGKNVREWSDEGKTTWIRFATGDTPNDRAFAVLLGYAV
VGLLLAIYLNILTVGSMRSAGRAVRNAVRQQLLVVKVAAFIIIELAIFPLGCGVMLDVCT
VWLFPQGSFRSRAAFLMYAPLTAVFYHWVLGTMFMYQFAVLLSGCRGIMRPGAMWFIKDP
QDQNFHPIRDILERPTLTQIRKLILSAIMYGFVVAAGVATVSGILRLFSRTIMPFRWRIR
EPLSEVPLDLILLQLVLPYTMESFRPRKALRRFGSSLWKYLASRLRLSSYMFGGRYATEE
FTPKNWSWRFLLIQDGIQMDDAEALHDGDFKRVPNSDNVALVRDSPATAPVLEDGTPVDE
DARRLIDAQDAEAQKARRLVKDDYTVVYIPPHFRRRIIAFLLCLWLTGSVMLASVLAAPI
LVGRGFFHLFIPHDVHDGYSFIVGFYLLWGCWLVGSALDRMDKRRQRRWNSEEQRAEWPL
FVLKRVLLWTAQASYMIVMLGVIIPTLVGLVFELYMIQPIRRTASPLMEPRIRVVDMWAL
GLFYSKIIVRTLRMHPPAQGMMHGIERILRNGWTHLDPVRATKDVIAPLTLGLSGMIVLP
AVVLWGLQRVVTLPLDGDFLFLHVYPGIFTVAGLVHAAYSLSKVMASWSQTIRDKEFLVE
LRLRNLELEQENSTEQQAEARVEVTPEVEE
NT seq
4773 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaggatcaagacacctgccgaatctgcagcgcccccgcggagcccggacagccg
ttgttccatccctgcaagtgctctgggacgatcaggtatattcatcaggattgcttgacg
gaatggctcgcacacagcaagaagaagacctgcgatgtgtgcaaacacccgtactcgttc
accaaggtgtattccaaggacatgcccgagaggctgcccatcctcctgatcttgcgacag
ttttcccatcaagtggtatccgccattcttttcgctctccgcgcagctctcgtagcgact
gtctggctagcagctctgccgtgggcaacgatttggacatggagggtgtacttcgctttg
ggcgattcagctgcatggtggatcagcgcaatgaagaggcccccttctgaactcgacttc
taccttggcgtcgtcgcgaacggcactgttgcgaatgccacgtcctctgattccgcggac
gcgcagtcccccactcccatatcccttttcgtccatcccatgtaccgcaccatctcatca
gatatcttctccggtcagatcatcgcgtctatcattgtactcagcttcgtcgcaatattc
ctcctcagggagtggatcacacaaaacgctcgccctggcgtgttcgaggacggtgatggt
gtagttgacccgggcgcggatgcgttacccccgcttcctgaaaacccacctccccaagct
caagaaccgccagtgcaccttgtgccgcgactaccgcccccaccaccacccgttgtcgcg
gaacctgaacacgaccgagccattccgttaccggacagccgttatgggcggcgtgatgat
tatgctttccaagcgcgtacgaagaagccacgtacaagaggaagcgctcaagcgtccgag
gacagtcaagaagcgggtccgtcacgcgtcgcgaaggggaagcggagggtgcacacgact
gcactcgaggagcgtcggtcattgagagctcgtcggagggttcggaggacgaggattttt
gaaggggactccagctttgatgagggcgcggctttgcatgacgacaaggacttccggcgg
ctgcggtatgtcgcgcatagagcggaagacttcgatgaagagctacggaagcggaatggc
agctcgtccaagtccgagcccgagcccgagcccgagaattggccgccggaacgcaatcac
aggcgtccgcgagacccgaatcaacttcctgctttctcggagttcacgtttacttatcct
tcgccgtctacctcgaatggcgatgcgcactcaccttcggccggtacgtcaacgaatcct
tacaaggagaagggaaatggcaacctgcccgccagtatctccttcgcaccctcatctccc
cgctccgacagcgacgatgacgaagacgaggacgacgaagacgagcggacgcctactaga
ccgtccactccggtactcgcaacctcgagtagtgcgagttacgatttcatcaatgtcgag
gacgctacggcggatgtgatgcagccttcgacctccacggccggcctgcggcggcctcct
ctacctaccatgacgctccccccgtcgcccattccgtctagctctcaggcggcgctcggg
gacaccccactagcctctcctagcctcgcgacctaccgcgcgccggaagagttggaggtg
cctcctgatgcggagccagattacttcgtgcgtgattacctgcgaaatttgcagccggac
cggtacctggaccccgagcgcgtcgaagaggagcatgcgcgctacttccgcgacccggcc
gagcagcacgacgatgacgacgagagctccgacacagaattcgacacggacgaggaaacg
gagatgcggaggctcgcgcttgcgcggtccggatttaaggaagaggcggaggcgatgcgg
cgcgcgagagtgcaggagatggcggagatggcggacggggagatggacgtggacgatgag
ggtgaggccattatggaggaaacgcagtggacggacgatgatgggctgcaagacgacgat
gaggacgacgacgagggcgaacccttcgtgcagttgagggaagagcttggtgggccgctt
cctggggatgcggaggatggcctaccaggcgctgcgcaggacaggagggagctgagggtg
ttaggccagcccccggagttagagcagttgccggaggatctcgacgcggaggtcaatatc
gaggacgacatggatggcgcgttggaggccatcggtctgaggggaccgctcgttggtgtg
ctacaaaacgccgtgctcatgaccgtcatcttggacactactatcggcctggggatattc
ctgccgttcatcatcgggaagtcaactgcgctcttgacactcaatccgcgtcgagctgca
caactgattcacttaccccttcggttgattcgtttggtcacggaccccattgtcgactcc
gtcctcctgttcttctcgaaacttgtgctgccgccgctagttcagttatgccagacggcg
ctccagtcaggtatgaagggaattgcacgtaatgttggtcaagatcgagcggataagctt
gcagagttgtccacggtcgcctacgggaacctactctcaattgcctctcaggtcatggac
cattcgcctccgtctactccttcggattccgtcgtttctgcagccaagccatcttcgtcg
atcttctatcgcatactggaagaggacaccacgctcatgcgcatagcggagccttacttt
gctcctatagggaagaatgtccgcgagtggtccgacgaaggcaagacgacatggattcgc
tttgcgactggagacacaccaaacgaccgagcgtttgccgtacttctcggctatgccgtc
gtcggtttgcttttggccatctacttgaacattctcaccgtcggcagcatgagaagcgcc
ggtcgtgccgtacgcaacgctgttcgtcagcagctgcttgtggtcaaggtcgcggcattc
atcatcatcgagctggccatattccccctcggatgtggcgttatgctcgatgtctgcacg
gtgtggctattcccacaaggcagcttccgttcacgggccgcgtttttgatgtatgcgcca
ttgaccgcggtgttctaccactgggttttgggcacgatgttcatgtaccagttcgccgtc
ctcctgtctggttgccgtggaatcatgcgccctggggctatgtggttcatcaaggatccg
caggaccagaacttccacccaatccgcgacattcttgaacgcccaacccttacccagatc
cgcaagctgatactgagcgcgataatgtacgggttcgtggtcgcggctggggtggctacc
gtgtcgggcattctacgactcttcagtcgcaccatcatgccgttcaggtggagaattcgt
gagcctctgtccgaggtgccccttgatttgatcctgctccagctagtattaccctacact
atggagtccttccgacctcggaaagccctgagacggtttggctcatcgctctggaagtat
ttggcttcgcggctccgcctttcgtcatatatgtttggtgggcgctatgctacggaggaa
ttcacgccgaaaaattggtcttggaggttcctcctcattcaagacggcattcaaatggac
gatgctgaggcccttcacgacggagatttcaagcgagtacccaacagcgacaacgtggct
ctcgtaagggactcgcctgcgacagcccccgtcctcgaggacggcactcccgtcgacgag
gatgcgagacggttgatagacgcccaggacgccgaagcacagaaggcgaggcggctcgtc
aaagacgactacaccgtggtctacatcccgccacatttcaggcggcgaattatcgcattc
ctcctgtgcctgtggctcactggttccgtcatgcttgcctctgtcctcgcggctcccatc
ctggtgggccggggcttcttccatctgttcatacctcacgacgtccacgacggctactcc
ttcatcgtgggcttctaccttctctggggatgctggctcgttggttccgctttggaccga
atggacaagcgccgtcagcggcgttggaatagcgaggagcaacgtgccgaatggcctttg
ttcgtcctcaaacgcgttttgctttggaccgctcaggcatcgtatatgatagtcatgcta
ggtgtcatcatccctacgcttgtcgggctcgtgttcgagctatacatgatccagcccatc
cggcgcactgcatccccgttgatggagccccgtatccgcgtcgtggacatgtgggctctg
ggcttattctacagcaaaatcatcgttcgcacgctacgcatgcaccctcctgcacagggt
atgatgcatggaatcgagcgtattctgcggaacggatggacgcacctcgacccagtaaga
gcgacaaaggacgtcatcgcccctctaacactaggtctgtcgggaatgatcgtcctccct
gctgttgtgctatggggcctccaacgtgtcgtcacccttcctctggacggcgacttcctc
ttcctacatgtctatcccggaatcttcacagtggctgggctagtacatgctgcctattcc
ttgtcgaaggtgatggcgtcttggtcacagaccattcgcgacaaggagttcctcgtggag
ttgcgcttacgcaacttggaattggagcaagaaaacagcactgagcagcaagcagaagca
agggtagaggtcacgccagaagtagaagagtaa
DBGET
integrated database retrieval system