Desulfurobacterium thermolithotrophum: Dester_1154
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Entry
Dester_1154 CDS
T01427
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
dte
Desulfurobacterium thermolithotrophum
Pathway
dte03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dte00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dester_1154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dte03019
]
Dester_1154
03009 Ribosome biogenesis [BR:
dte03009
]
Dester_1154
Enzymes [BR:
dte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Dester_1154
Messenger RNA biogenesis [BR:
dte03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Dester_1154
Ribosome biogenesis [BR:
dte03009
]
Prokaryotic type
rRNA helicases
Dester_1154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
CMS1
ERCC3_RAD25_C
P-loop_SecA
Helicase_C_2
AAA_30
DUF1694
DUF243
PRAI
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
ADY73791
UniProt:
F0S0B2
LinkDB
All DBs
Position
complement(1150992..1152269)
Genome browser
AA seq
425 aa
AA seq
DB search
MAIFIKKGEKMEFTFNQLDLKVQKSLEEMGFESPTPIQKEAIPLALEGYDIVGQAQTGTG
KTAAFGIPIIENINSRERGVKAIVLTPTRELAIQVAHELSLIGKNKGVSAYPIYGGVSIE
RQANILKRGRNQIVVGTPGRVKDLISRGLLKLDRVRFAVLDEADQMLDMGFIEDIEEILS
KTPREKQTLLFSATMPYEIRKLIDNYLKSGYKTIKVGKNLITPKVHQRIIFVKSEDKLKA
LEKLLKEHQGTSTIVFVKTKRDAAEIEKELQKRSINARAIHGDLSQRQRENVMKAFKEGK
VKTLVATDVAARGIDIKDVGLVINYELPENPESYVHRIGRTGRAGREGTAISLVADNEKR
RIYRIKGLKHIKPEKFKANDLRDLKQDLLSADVGKVSEKIRKVAKELLRERDPEEVISLL
IAKLI
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
gtggcaatttttattaagaagggagaaaaaatggaatttacgttcaatcaacttgattta
aaagttcaaaagtctttggaagaaatgggatttgagagtcctactcctattcagaaagaa
gcgattcctcttgctcttgaaggatacgacattgtaggacaagcccaaacaggaacaggg
aaaactgcagcctttggtatccctataatagaaaacataaattcgcgagaaagaggtgtt
aaagcaatagttcttactcctacaagagaattagcaatacaggtagctcatgaactttct
cttataggaaagaataaaggagtttctgcatatccgatttatgggggcgtttctattgag
agacaagcaaatattctaaaaagaggaagaaatcagatagttgtcggaactcccggaaga
gtaaaagacttaataagtagaggacttttaaagcttgatagggtaagatttgctgtttta
gatgaagctgatcagatgcttgatatgggatttatagaagatattgaagaaatcctttct
aagacacctagagaaaaacagactttattattttctgcaactatgccttacgaaattaga
aagcttatagacaactatcttaagtcaggttataaaaccattaaagttggaaaaaatcta
ataactccaaaggttcatcagaggattatttttgttaaaagcgaagataagttaaaggct
ttagaaaagcttttaaaagaacatcaaggaacctctacaattgtttttgttaaaacaaaa
agagatgctgcagagatagagaaggagctccaaaaaagaagtatcaatgccagagcaatt
catggggatctttctcaaagacagagagaaaatgtgatgaaagcctttaaggagggtaaa
gtaaagaccctcgtggcaaccgatgttgcggcaagaggtattgatatcaaagacgtagga
ttagtcataaactatgaacttccagaaaatcctgaaagctatgttcacagaatcggaaga
actggaagagctggtagagaaggaactgcaatcagtttggtcgcagataatgaaaaaagg
agaatttacaggataaagggattgaagcacattaagccagaaaaatttaaagcaaatgat
ttaagagatcttaaacaagacctcctttctgccgacgttggtaaagtttcagaaaaaatt
agaaaagtagctaaggagctcttaagagaaagagatcctgaagaagttatttctctttta
atagctaaactaatttaa
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