Candidatus Desulfovibrio trichonymphae: RSDT_0095
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Entry
RSDT_0095 CDS
T05578
Symbol
gcvPB
Name
(GenBank) glycine dehydrogenase subunit 2
KO
K00283
glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:
1.4.4.2
]
Organism
dtr
Candidatus Desulfovibrio trichonymphae
Pathway
dtr00260
Glycine, serine and threonine metabolism
dtr00630
Glyoxylate and dicarboxylate metabolism
dtr00785
Lipoic acid metabolism
dtr01100
Metabolic pathways
dtr01110
Biosynthesis of secondary metabolites
dtr01200
Carbon metabolism
Module
dtr_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
dtr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RSDT_0095 (gcvPB)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RSDT_0095 (gcvPB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RSDT_0095 (gcvPB)
Enzymes [BR:
dtr01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
RSDT_0095 (gcvPB)
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GFIT
Motif
Pfam:
GcvP2_C
GDC-P
Motif
Other DBs
NCBI-ProteinID:
BAV91607
UniProt:
A0A1J1DP44
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All DBs
Position
complement(126083..127531)
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AA seq
482 aa
AA seq
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MKTIFAKSVPGRGACQVDSADAPAAAHMLPAGLLRIHPPLLPRCSELDVVRHFTGLSQRN
YSVDANFYPLGSCTMKYSPKFTEYVASLPGFARLHPLLARLERGEACAQGALQCLYEAER
WLCEITGMEAFTLQPMAGANGEFTGVSFMAAYHRAKGRKRAKILIPDSAHGTNPASAALA
GFEIISIESRDGMIDPDVLSAVIAEHGDDVAGLMMTCPNTLGLMELHLPRIVAELHGADA
LLYYDGANMNAIMGKMRVGDAGFDVVHLNLHKTFATPHGGGGPGSGPVGVTARLAPFLPA
PRVAVRENGSFYLDDNLPQSIGAMTPFYGNFGVVLKALAYMLRLGGDGLARVAEYAVLNA
NYLKKRLEDVLDVPFDKLCAHEFVASAPEGLRALDIAKALLERGFHAPTVYFPLIVRECL
MAEPTETESRETLDAYVEALREIVAQGKADPRALAEAPRNLPVRRLDETAAARRMVLTED
MG
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaccatcttcgccaaatccgtgcccggccgcggcgcgtgtcaggtggactccgcc
gacgctccggcagccgcccatatgctgccagccggcctgctgcgcattcatcctccgctc
ctgccccgatgctcggaactggatgtcgtgcggcacttcacgggactttcccaacgcaat
tacagtgtggatgccaatttttatccccttggctcctgcaccatgaaatacagcccgaaa
tttacagaatacgttgcctcgctgcccggcttcgcccggctgcacccgctgctggcccgg
cttgagcgaggggaggcgtgtgcgcagggcgcgctgcaatgtctgtatgaggctgaacgc
tggttgtgtgaaataacgggcatggaggccttcacactgcagccgatggccggcgccaac
ggcgaattcactggcgtcagctttatggcggcctatcaccgggccaaaggcagaaagcgc
gccaaaatactgattccggattcggcgcacggaacaaatccggcatcagccgctctggcg
ggttttgaaatcatcagcattgaatcccgcgacggcatgattgacccggacgttttgtcc
gcggtcattgccgaacacggtgacgatgtggcggggctgatgatgacatgcccgaatacg
cttgggctcatggaactgcacctgccgcgcattgtggctgaactgcacggggcggacgcc
ctgctgtactatgacggcgccaatatgaacgccattatgggcaagatgcgtgtcggcgac
gcaggctttgacgtcgtgcacctcaatctgcacaaaaccttcgccacgccgcacggcggc
ggcggtcccggttcagggccggtgggcgtcaccgcgcggctggcgccttttttgccggcg
ccgcgtgttgccgtgcgtgagaacggcagtttttatcttgacgacaacctgccgcagtcc
atcggcgctatgacgccgttttacgggaattttggcgtggtgctcaaagccctggcctat
atgcttcgccttggcggagacgggctagcccgcgtggcagaatacgccgtgctcaacgcc
aattatttgaaaaaacgtcttgaagatgtgctggatgtgccctttgacaaactctgcgcc
cacgaattcgtcgcctccgcgccggaagggctgcgcgctctggatatcgcaaaggcgctg
ctggagcgcggctttcacgcgccgacggtctattttccgctgattgtcagggaatgcctg
atggccgaaccgacagaaacggaaagcagggaaactctggacgcgtatgtggaagccttg
cgggagatcgtggcgcaaggcaaggccgacccgcgtgctttggcggaagcgccgcgcaat
ctgcctgtgcgccgcctggatgaaaccgctgccgcgcggcgcatggtgcttaccgaagat
atgggataa
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