Dyella thiooxydans: ATSB10_24460
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Entry
ATSB10_24460 CDS
T04308
Name
(GenBank) exodeoxyribonuclease V
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
dtx
Dyella thiooxydans
Pathway
dtx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dtx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ATSB10_24460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dtx03400
]
ATSB10_24460
Enzymes [BR:
dtx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ATSB10_24460
DNA repair and recombination proteins [BR:
dtx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ATSB10_24460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AND69900
UniProt:
A0A160N292
LinkDB
All DBs
Position
complement(2614242..2617712)
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AA seq
1156 aa
AA seq
DB search
MRPAPTDDFHRGLVIYRASRLEALLDPLLTLLDSAPPAHVLAPQTVIAAHPGMRHWLAGA
LARKRGTGGIVANLRISLPSSWLDELALTVLGSGAVALTPYRRDRLRWRIHEHLPDIDYA
RVQAYLAGGDAARRRYQLADRLARLYTQYLVYRPDWLDAWEHGRDDLPEPTFMAPLWRQL
RAEIGLPHRGERVQALVRELARDPARHASDEPLHLFGISHLAPAELALLGAVSQLRPVVL
YVPDPCREFWAGLRGEREQLREVAARTDFSAASEQHFLQMGHPLLAAWGRMGQHFMLNLQ
RFDDAIAMDVRHWQDEAPPPGERDGLLQRLQESLRALDPASIAPLQGGTDAALADRSLRV
HLCHTRLRELEVLRDALLAELAARPDLKPSDIVVMAPDIAAYVPLLPAVFGEAGRHHGPL
PYHLADVAVARTHPLLDAFSRLLAVPESRLTAPELLDLMQVPEVARALGLGEGDVDTLAR
WLRQGRVAWALDGAFREGFGVPGIDEHTFAWGMDRLLAGYVLGDADTGDTGWSLPDGELW
PVEGVHGPQAAILGALDRLLLALAELHRDAAEPRTASAWAARLERLLDTLFRIDPRDRDA
VDALSLLRRFLQATRVETADCGLDPLLEFPVVREVLRERLAAAPERQRFLLGGVTFCGMV
PQRAIPFRVIAVLGLNDGEFPRSVGDAGLDLMQHHRRLGDRDVRSDDRYLFLETVMAARE
VLHLSYIGEGVRDGKPRNPAAPLAELLQCLDDQAGLRGVDADADDKAPVPGTPRTIHRPW
RIKHPLQPFDRRYFDGRDPRLFTFDGGSAGMVRGEPIAPFLERTADAPTADDETGVIALR
EVQAYFRDPARQLLAQRLHVRLDALEDDRLQADEPLQPGFSALDQVGRRLLLDALGEGRF
ELPEQAPAWLRLSGLLPGGRLGLAAWIAERDAVNALLATARAHPLFAGALPQRQPRALAL
TVGEHTVEGALDRVFVTGDALWLFEAWPGKKPESLTFRERVPLFLDWALLRLAANPATAV
RVAVFTADDKTDLGAPFNAWDEAMLAADPASAQAMREALAARVAGLLEIWRQAQQQPLPY
FPRTSWAALDDKPEAARQAWEGGFNTGERDYAPGYARLLAGETNFADGQPQHAELQALAA
RLARLIDPATLAEVTA
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgcgacctgcccccacggacgacttccaccgcggcctggtgatctaccgggccagccgg
ctcgaagccctgctcgatccgctgctcaccctgctcgacagcgcaccgccggcgcacgtg
ctggcgccgcagacggtgatcgccgcgcacccgggcatgcgtcactggctggccggcgcg
ctggcgcgcaagcgcggcactggcggcatcgtcgccaacctgcgcatctcgctgcccagc
agctggctcgacgaactggcgctcaccgtgctcggcagcggcgcggtggcgctcacgcca
taccgccgcgaccgcctgcgctggcggatccacgaacacctgccggacatcgactacgcc
cgcgtgcaggcctatctcgccggtggcgacgcggcgcgccgtcgttaccagctggccgac
cgcctggcgcgcctctacacgcagtacctggtctaccggccggactggctcgacgcctgg
gagcacggtcgcgacgacctgccggaacccaccttcatggcaccgctgtggcgccagctg
cgcgcggagatcggcctgccgcaccgcggcgagcgggtgcaggcgctggtgcgcgagctg
gcgcgcgatcccgcccgccacgccagcgacgagccgctgcacctgttcggcatcagccac
ctggccccggccgagctggcgctgctgggcgcggtgagccagctgcgtccggtggtgctg
tatgtgcccgatccctgccgcgagttctgggccggcctgcgcggcgagcgcgagcagctg
cgcgaggtggccgcgcgcaccgatttcagcgcggcgtccgagcagcatttcctgcagatg
gggcatccgctgctcgccgcctgggggcgcatgggccagcacttcatgctgaacctgcag
cgcttcgacgacgccatcgccatggacgtgcgccactggcaggacgaggcgccgccgccg
ggcgagcgcgacggcctgctgcagcggctgcaggaaagcctgcgcgcgctcgatcccgcg
tcgatcgccccgttgcagggcggcaccgacgcggcgctggccgaccgctcgctgcgcgtg
cacctgtgccacacccggctgcgcgaactcgaagtgctgcgcgatgccctgctcgccgag
ctggccgcgcgaccggacttgaaaccctcggacatcgtggtgatggcgccggacatcgcc
gcctacgtgccgctgctgccggcggtgttcggcgaggccggccgccatcacggaccgctg
ccgtaccacctggccgacgtggcggtggcgcgcacgcatccgctgctcgacgcgttcagc
cggctgctggcggtgcccgagtcgcggctcaccgcgccggagctgctcgacctgatgcag
gtgccggaggtggcacgtgcgctggggttgggcgagggcgatgtcgatacgctggcgcgc
tggctgcgccaggggcgcgtggcctgggcgctggacggtgcgttccgcgagggcttcggc
gtgcccggcatcgacgagcacaccttcgcctggggcatggaccgcctgctcgccggctac
gtgctgggcgacgccgacaccggcgacacgggctggagcctgccggacggcgagctgtgg
ccggtggaaggcgtgcacggtccgcaggcggcgatcctcggcgcgctggaccgcctgctg
ctggcgctggccgagctgcatcgcgacgcggccgaaccgcgcaccgcctcggcctgggcc
gcgcggctggagcgcctgctcgacacgctgttccgcatcgatccgcgcgaccgcgatgcg
gtggatgcgctgtcgctgctgcgccgcttcctgcaggcgacccgggtggagaccgccgac
tgcgggctcgacccgctgctggaatttccggtggtgcgcgaggtgctgcgcgaacggctc
gccgccgcgccggagcgccagcgcttcctgctcggcggcgtcaccttctgcggcatggtc
ccgcagcgcgcgatcccgttccgggtgatcgccgtgctcggcctcaacgacggcgaattc
ccgcgcagcgtgggcgacgccgggctggacctgatgcagcaccaccgccgcctcggcgac
cgcgacgtgcgcagcgacgaccgctacctgttcctggaaacggtgatggccgcgcgcgag
gtgctgcacctgtcgtacatcggcgaaggcgtgcgggacggcaagccgcgcaacccggcc
gcgccgctggccgagctgctgcagtgcctggatgaccaggccggcctgcgcggtgttgac
gccgacgcggacgacaaggcgccggtgccgggcacgccacgcacgatccaccggccgtgg
cgcatcaagcatccgctgcagccgttcgatcgtcgctacttcgacggccgcgatccgcgc
ctgttcaccttcgacggcggcagcgccggcatggtgcgcggcgagccgatcgcgccgttc
ctcgaacgcacggccgacgcgccgacggcggacgacgagaccggcgtgatcgccctgcgg
gaggtgcaggcctatttccgcgatcccgcacggcaactgctggcgcagcgcctgcacgtg
cgcctggatgcgctggaggacgaccgcctgcaggccgacgagccgctgcagccgggtttc
agcgcgctggaccaggtcggtcgccgattgttgctggacgcgctgggcgagggccgcttc
gagttgccggagcaggccccggcctggctgcggctgagcggcctgctgcccggtggccgg
ctcggtctggctgcctggatcgccgagcgcgacgcggtgaacgcgctgctggcgaccgcg
cgggcgcacccgctgttcgccggcgcgctgccgcagcgccagccccgcgccttggctctc
acggtgggcgagcacacggtggaaggcgcgctggatcgcgtgttcgtcactggcgacgcg
ctgtggctgttcgaggcctggccgggcaagaagccggagtcgctgacgttccgcgagcgc
gtgccgctgttcctcgactgggcgctgctgcgcctcgccgccaatccggcgaccgcggta
cgggtggcggtattcaccgccgacgacaagaccgatctgggtgcgccgttcaacgcctgg
gacgaggcgatgctcgcggccgatccggcctccgcacaggcgatgcgcgaggcactggcc
gcgcgcgtcgccggtttgctggaaatctggcgacaggcccagcaacagccgttgccctat
ttcccgcgtaccagctgggctgcgctggacgacaagcctgaggccgcgcggcaggcctgg
gagggcggcttcaacaccggcgagcgcgactacgcccccggctatgcacgcctgctcgcc
ggcgagactaacttcgccgacggccagccgcagcacgccgaactgcaggcgctggccgcg
cgcctggcgcgcctgatcgacccggccacgctcgccgaggtgaccgcatga
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