Dyella thiooxydans: ATSB10_29150
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Entry
ATSB10_29150 CDS
T04308
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
dtx
Dyella thiooxydans
Pathway
dtx00300
Lysine biosynthesis
dtx00470
D-Amino acid metabolism
dtx01100
Metabolic pathways
dtx01110
Biosynthesis of secondary metabolites
dtx01120
Microbial metabolism in diverse environments
dtx01230
Biosynthesis of amino acids
Module
dtx_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dtx00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ATSB10_29150
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ATSB10_29150
Enzymes [BR:
dtx01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ATSB10_29150
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AND70369
UniProt:
A0A161JJG6
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All DBs
Position
3127807..3128640
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AA seq
277 aa
AA seq
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MTLRFSKMHGIGNDFVVLDRRHDPSVLDVALVRAMADRRKGVGFDQLLTVEPARDPSCAF
YYGIWNADGSPSGQCGNGARCVAAWLHRAGALPLGRTVRLESPSGPVAVQLQAPLDVAVD
MGEPVFEPSRVPFQRTRDVDGHPLVVGSDTLTIGVASMGNPHAVLLVEDIDAPGVDALGP
RITTHPDFPQQVNAGFAQPLARDHIRLRVHERGAGWTLACGTGACAAMAVLRRRGLVDTE
VRVDLPGGSLTITWPGPGHTLWMRGPAAFVFEGEWPA
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgcgcttttccaagatgcacggcatcggcaacgacttcgtcgtgctcgatcgc
cggcacgatccttccgtcctggatgtcgcgctggtccgcgccatggcggatcgtcgcaaa
ggcgttggtttcgaccagctgctgaccgtcgagccggcgcgcgatccctcctgtgccttc
tattacggcatctggaatgccgacggctcgccgtccggccagtgcggcaatggcgcgcgc
tgcgtcgctgcctggctgcaccgcgccggggcgctgccgctgggccggacggtgcggctg
gagagtccgtccggcccggtcgcggtgcagctgcaggcgccgctggacgtggcggtggac
atgggtgagccggttttcgagccgtcgcgcgtgccgttccagcgcacgcgcgacgtcgac
ggtcacccgctcgtcgtgggcagcgacacgctgaccatcggcgtggcatcgatgggcaat
ccgcacgcggtgctgctggtggaagacatcgacgccccgggggtggacgcgctggggccg
cgcatcaccacgcacccggattttccgcaacaggtcaacgcaggcttcgcccagccgctg
gcgcgcgaccacatccggctgcgcgtgcacgaacgcggcgccggctggacgctggcctgc
ggcaccggggcctgtgcagcgatggcggtgctgcggcggcgtggcctggtggacactgaa
gtgcgcgtggatctgcctggcggctcgctcacgatcacctggcccggccccggccatacg
ctgtggatgcgcggtccggccgccttcgtgttcgagggcgagtggccggcgtga
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