Duncaniella sp. B8: FDZ78_13650
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Entry
FDZ78_13650 CDS
T05963
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
dun
Duncaniella sp. B8
Pathway
dun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FDZ78_13650 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dun03400
]
FDZ78_13650 (priA)
Enzymes [BR:
dun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FDZ78_13650 (priA)
DNA repair and recombination proteins [BR:
dun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FDZ78_13650 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_CRR
Helicase_C
PriA_C
zinc-ribbons_6
UPF0236
DZR
Motif
Other DBs
NCBI-ProteinID:
QCP73513
LinkDB
All DBs
Position
3180440..3182908
Genome browser
AA seq
822 aa
AA seq
DB search
MTFVEVLLPVPISGTFTYSVPEALADSVRIGYRVIVPFGRKKFYTGIIASQTQVAPQGYE
VKDIALILDEWAVVKHPQLKFWNWMADYYLCTPGEVMRAAMPAGLKIESETFVSADPDYE
EKPYERLSQREMVVMNYILGCEKKQPLDLIGKKTGFANIGPIINSLLEKGAVQISENLVE
RYRSRKETYVRLTVDKGDSDGLHKAFDSVRSGSMQEKALLALIEISAFMRQDSELQEVTR
TELMERSGVTTTVIAAMAKKGIVDIYKKEISRFSYSGLVTGELPVLSEAQASALDSIHKS
WFEKDITLLRGVTSSGKTEIYIHLIDYVLRQGRQALYLVPEIALTTQLTRRLQRVFGDKV
VIYHSKFSDNDRVDIWKKLLASSDPCVVIGARSAVFLPFASLGLVIVDEEHESAYKQQDP
APRYNGRDAAIVLASMHGAKTLLGSATPAVDTYYKALTGRFGLVELTERYEGLRLPHVEI
VDMAAARKRGEVEGTFSLLTRRLVNESLQRGEQSILFINRRGYAPIARCKLCGYVPKCEN
CDVSLTYHRHSDKLICHYCGTPYGVPEVCPACKEPGIEVLGYGSERVEEEIDSLFPTASI
ARMDLDTTRSKDGYETIIDNFSKGKSQILVGTQMVTKGLDFGRVSVVGVINADSIVNFPD
FRASERAFNMIEQVAGRAGRKSDNGVVAVQTYNPSHPLFDFLVRHDYEGYYQREIQERQQ
YNYPPFVRIIYVYIKHKDPAAVSAIAFEFASRLRVLLGNRVSGPDEPYVARIQTLYIRRI
MLKIETQASISKVKSLLNDIRIEMTNSRQLSGAVLYYDVDPM
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgacttttgttgaagttcttctgccagttcctataagcggaacgttcacctacagtgtg
cctgaggccttggctgattccgtcagaatcggttatagggtaattgttccgttcggaaga
aagaagttttacacaggtattattgcctctcagacacaggtggctcctcaggggtatgag
gtaaaagacatcgctttgatcttagatgaatgggccgtggtcaaacatccgcagcttaaa
ttttggaactggatggcagactattatctctgtactccgggagaagtgatgagagcagcc
atgccggcgggattgaaaatagagagtgagactttcgtgtctgccgatccggattatgaa
gaaaagccttatgagagactctcgcaaagggaaatggttgtgatgaactatattctgggc
tgtgagaagaagcagcctcttgatctgatcggcaagaagaccggatttgcaaacataggc
ccgataataaattcacttcttgaaaagggagcggtgcagatttcagaaaatcttgtagag
cgttatcgttctcgtaaggaaacttatgtaagactgacggttgataaaggtgattccgat
ggtttgcacaaggcttttgattctgtcaggtctggcagcatgcaggaaaaagcccttctg
gccctgattgagatttcggctttcatgcgccaggattcggaacttcaggaggtgacacgc
acggaactgatggagcggtcaggagtaacgactactgtgatcgcggcgatggcaaagaaa
gggattgtagatatttataaaaaagagatcagccggttttcatattcaggacttgtcaca
ggtgagttgcctgtactgagcgaagctcaggcctcggctctcgacagtattcataaatca
tggtttgaaaaggatatcacccttctccgcggagtcacttcaagcggaaagactgaaatc
tatattcatctgattgactatgttctgcggcaggggcggcaggctctatatcttgtgcct
gaaatagcgctgacaacccagttgacccgtagactgcagagggtgttcggcgacaaggtg
gtgatctaccattcgaaattctcggataatgaccgtgtcgatatctggaaaaagctactc
gcctcttcagacccctgcgtggttattggggcccgttctgccgtgtttctgccgtttgcg
tcattggggcttgtgatagttgatgaggagcatgaaagcgcttacaagcagcaggacccg
gctccgagatacaatggacgcgatgcggctatcgtgctggcttcaatgcatggtgcaaaa
actcttctcggaagtgccactccggcagtcgatacatattacaaagctctgacaggacgc
ttcgggctggttgaacttactgaacgctatgaaggtctccggcttcctcatgttgagata
gtcgacatggcggcagcgagaaagaggggagaggttgaaggcactttctctcttctcacc
aggagacttgtcaacgaatctcttcagaggggcgagcagtcgatactttttatcaaccgc
agaggctatgcaccgatagcacgctgcaaactttgcggttatgtgccgaaatgtgaaaat
tgtgatgtctcgctgacatatcacaggcattccgacaaactgatatgtcattattgcggt
accccctacggtgtgcccgaagtctgcccggcatgcaaggaaccgggcatagaagttctc
ggttatggaagcgaacgtgttgaagaggaaatcgactccttgtttccgacagcctcgatc
gcccgcatggatctcgataccacgcgcagtaaggacggatatgaaacgataattgacaat
ttctcaaaagggaagtctcagatattggtcggaacccagatggtgaccaaaggtcttgac
ttcggacgagtgagcgtggtaggagtcataaatgccgacagtatagtgaattttccggat
ttccgtgcatcggagcgcgcgttcaatatgatcgagcaggtggccggacgagccggtagg
aaaagtgacaatggagtggtggcggttcagacatataatccttctcatcctttgtttgac
tttcttgtccgtcatgattatgaaggttactatcagcgggaaattcaggaacgccagcaa
tataattatccgccttttgtaagaataatatatgtatatataaaacacaaggacccggcg
gcagtgtcggctatcgcatttgaatttgcttcgcgcctgcgtgtgttgcttgggaataga
gtcagtggtcccgacgagccatatgtggcaagaattcagactttatacataagacgtata
atgcttaaaatcgagactcaggcctcgatttcaaaagtcaagagcctgctgaatgatata
aggatagagatgaccaacagccgtcagctttcaggtgcggtgctttactacgacgttgat
ccaatgtaa
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