Dermabacter vaginalis: DAD186_15950
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Entry
DAD186_15950 CDS
T04434
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dva
Dermabacter vaginalis
Pathway
dva03030
DNA replication
dva03430
Mismatch repair
dva03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DAD186_15950
03430 Mismatch repair
DAD186_15950
03440 Homologous recombination
DAD186_15950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dva03032
]
DAD186_15950
03400 DNA repair and recombination proteins [BR:
dva03400
]
DAD186_15950
Enzymes [BR:
dva01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DAD186_15950
DNA replication proteins [BR:
dva03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DAD186_15950
DNA repair and recombination proteins [BR:
dva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DAD186_15950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
DUF655
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ANP28145
UniProt:
A0A1B0ZJD5
LinkDB
All DBs
Position
complement(1775980..1779537)
Genome browser
AA seq
1185 aa
AA seq
DB search
MGMASEDFVHLHVHTDYSMLDGASKISKLVNAAAEAGQKAVAITDHGYVFGAYEFYKNAV
AAGVKPIIGVEAYVTPGTSRHDRSRVQWGTKAQQDAGDDVSARGAYTHLTLLSRTTAGMH
NLFRLASYASLDGQMGKWPRMDREILSKYSDGLIASTGCPSGEIQTRIRLGQWDEAVKAA
GEYQDMFGKENYFVELMDHGLELERRVTKDLIELSKTIDAPLLATNDLHYVYEDDAKIQD
ALLCINSGSTFDTPGRFKFDGSGYYLKSAREMRELFRELPEACDNTLRVAEMCDVEFTTT
AEGANYMPRFPVPAGEDEHSWFIKEVQRGLHERYPSGIPNEVQERADYEVGIITRMGFPG
YFLVVSDFIRWAKEHGIRVGPGRGSGAGSMVAYAMRITDLDPLPHGLLFERFLNPDRVSM
PDFDVDFDDRRRGEVLEYVTERYGDDKVAQVITYGVMKTKNSIKDSARVLGEPYALGDQM
TKALPPAVMGKDITLKGIFDENDKRYAEAEDFRRQYRENPSWQRVMDIAQGVEGLTRGWG
VHACAVIMSSETLTDIIPMMRRPSDGQIITQFDYPTCETLGLLKMDFLGLRNLTVISDAI
ENIETNGKDVPDLEHLGFDDPATFDLLQRGDTLGVFQLDGAGMRSLLRQMKPDKFGDISA
VSALYRPGPMGMNSHTNYALRKNGLQEITPIHPELEEPLHDILSETYGVIVYQEQVMQTA
QKVAGFTLGQADILRRAMGKKKKAELDKQYVGFRQGMLDHGYSDAAVQALWDVLLPFADY
AFNKSHSAAYGVVSYWTAYLKANYPTEYMAALLTSTQNNRDRLGLYLGDCRHRHITVLPP
DVNSSLMNFAAVGEDIRFGLSAIQNVGAHVVEEIIKTREEKGEFTSFTDFLDKVPLSVCN
KRTIDSLIKGGAFDSLGHNRRSLVLVHEDAVDGIVDVKRKEAQGQDDLFGGGMFGDDYAS
GSAATIQVPELPEWDRKQKLAFEREMLGLYVSDHPLQGLEHVIAQASSHSITALAETEDT
DALGMVTIAGLITSIQRKITKKGDTWAIVTVEDLEGAIDCLMFPQSYQQVATELAGDLVV
SMRGRVDNSKGSPEMRVQEMRVLDTSGAMADGPLMITVPDSRMTGEVAQQLRGILEDHPG
GSEVRVRLTEPGRATLMRVDRRLSVAPSPALFASLKTLLGAQCLH
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
gtgggcatggcttccgaggatttcgttcaccttcacgtccacaccgattattcgatgctc
gatggggcctcgaagatcagcaagctcgtgaatgccgctgcagaggccgggcagaaggcc
gttgccatcaccgatcacggttacgtgttcggagcctacgagttttacaagaacgccgtc
gccgcaggggtcaagcccatcatcggcgttgaggcgtatgtgactccggggacgagccgc
catgatcgctcgcgcgtccagtggggtacgaaagcgcagcaggatgccggcgacgacgtt
tcggcgcgcggtgcctacacgcacctcacccttttgagtcgcaccacggcgggcatgcac
aacctttttcgcctcgcgagctacgcctcgctcgatggccagatgggcaagtggcctcgc
atggaccgcgagatcctctcgaaatactccgatggccttattgcctcgacgggttgcccc
tcgggcgagattcaaacccgcattcgccttgggcagtgggacgaagccgttaaggctgcc
ggcgaataccaggacatgttcggcaaggagaactactttgtcgagctcatggaccatggc
ctcgagctcgagcggcgcgtcacgaaggacctgatcgaactgtcgaagacgatcgacgcc
cctcttctggcgacgaacgaccttcactacgtctacgaggacgatgcgaagatccaggac
gcgcttttgtgtatcaactcgggttcgacgttcgacaccccggggcgttttaagttcgat
ggttcgggctactacctcaagagcgcacgtgagatgcgcgagcttttccgggagcttccc
gaggcgtgtgacaacactctgcgggtcgccgaaatgtgcgacgtcgaattcacgacgacc
gcggagggcgcgaactacatgccgcgcttcccggtacccgcgggcgaagatgagcattcg
tggttcatcaaggaggtccagaggggccttcacgagcgctacccgagcgggattcccaac
gaggtccaggagcgggctgattacgaggtcggtatcatcacgcgcatgggcttcccgggc
tacttcctggtcgtttctgacttcattcgctgggcgaaagagcacgggatccgcgtgggg
ccggggcgtggctcgggtgcaggttcgatggtcgcgtacgcgatgcgcattaccgatctc
gatcctcttccgcacggtcttctgttcgagcgattcctcaacccggatcgcgtgtccatg
cccgacttcgacgtggacttcgacgatcgccggcgtggcgaagtactcgagtacgtgacc
gagcgttatggcgacgacaaggtcgcgcaggtcatcacgtacggcgtgatgaagaccaag
aactcgattaaggattcagcacgcgttctcggtgagccgtacgcgcttggtgatcagatg
acgaaggcgctcccgcccgcggtgatgggcaaggacattacgctcaagggcatcttcgac
gagaacgataagcgttacgcggaagcggaggatttccgccgccagtatcgggagaatccc
tcgtggcagcgagtgatggatattgcgcagggcgttgaaggcctcacgcgtggctggggc
gtgcacgcatgcgccgtcatcatgtcgagcgagaccctcacggacatcatcccgatgatg
cgccgcccttccgacgggcaaatcatcacccagttcgactacccgacgtgcgagacgctc
ggtctgctcaaaatggacttcctggggcttcgcaacctcacggtgatttccgatgcgatc
gagaacattgaaacgaacggcaaggacgttcccgacctcgagcacctcggtttcgatgat
ccggcaacattcgatctgcttcagcgcggcgatactctcggtgtgtttcagctcgatggt
gccggcatgcgctcccttcttcgccagatgaaacccgataagttcggcgacattagcgcc
gtgtcggccctgtaccgcccgggcccgatgggcatgaactcgcatacgaactacgcgctg
aggaagaacgggctccaggagatcaccccgatccatcctgaactcgaggaaccgcttcac
gacattctttccgagacctacggcgtgatcgtgtatcaggagcaggtcatgcagaccgcg
cagaaggtcgcgggcttcacgcttggccaggcggatattttgcgccgtgcgatgggcaaa
aagaaaaaggccgagctcgataagcagtatgtgggctttcgccagggcatgctcgatcac
ggttacagtgacgcggccgttcaggcactgtgggacgtgctcctgccgttcgccgactac
gcgtttaacaagtcccactcggcggcgtatggcgtcgtgtcgtattggacggcgtacctc
aaggcgaactacccgactgagtacatggctgcgctgctcacttcgacgcaaaacaatcgc
gaccgccttggcctgtacctcggggactgccgccaccgccacatcacggtgcttccgccg
gacgtgaactcctccctcatgaactttgcggccgtgggggaagacatccgttttggcctt
tcggcgatccagaacgttggtgcgcatgtcgtcgaggaaatcatcaagacccgcgaggag
aagggcgagttcacctccttcacggacttcctcgacaaggtccccctttcggtgtgcaat
aagcgcacgatcgattcgctcatcaagggcggcgctttcgactcgctcggccacaaccga
cgctcgctcgtgctcgtgcacgaggatgcggtcgatggaatcgtggacgtgaagcgcaag
gaggcccaagggcaagacgatctcttcggtggtggcatgttcggagacgattacgcctcc
ggtagcgccgccacgattcaggtgcccgagcttcccgagtgggaccgcaagcaaaaactc
gcttttgagcgcgagatgctcgggctttacgtgagcgaccacccgctccaggggctcgag
cacgtgattgcgcaagcgagctcgcattcgatcacggcgcttgcggaaaccgaggacacc
gatgcgcttggcatggtgacaatcgcggggctcatcacgagtattcagcgcaaaattacg
aagaagggcgacacgtgggcgatcgtcacggttgaggatctcgagggcgcgatcgattgc
ctcatgttcccgcagtcgtatcagcaggttgcgaccgaacttgcgggagaccttgtggtc
tcgatgcggggccgcgtggacaactcgaagggctcgcccgagatgcgcgtgcaagagatg
cgcgtgctcgatacctcgggcgcaatggccgatggccccctcatgatcacggtgcccgac
tcgcgcatgacgggggaagtcgcacagcagctccggggcatcctcgaagatcatcctggc
gggagcgaggtgcgtgtgcgcctcacggagccgggtcgcgcgaccctcatgcgggtggat
cggcgcctgtcggttgcgccttcaccggcacttttcgcgtccctcaagactctgctcggg
gcgcagtgcctgcactag
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