Desulfosarcina widdelii: DSCW_06530
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Entry
DSCW_06530 CDS
T06303
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
dwd
Desulfosarcina widdelii
Pathway
dwd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dwd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DSCW_06530
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dwd02000
]
DSCW_06530
Transporters [BR:
dwd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
DSCW_06530
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
BBO73236
UniProt:
A0A5K7YVA2
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All DBs
Position
complement(674151..675728)
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AA seq
525 aa
AA seq
DB search
MGIKVFQGMYRDGKINRREFMAAMGALGLSAAASGVLLKSGKALAATPQKGGVIRMASDI
HGPDDTMDPIAQTSTIDYARGRATYNNLIQILDDMSLHPELAEEWSSNSTATEFTFKIRK
GVHFHDGSPLTADDVVWSLNRHLGKKSTSVVKLLMESVSEWKKIDSHTVKAVLGTPNADL
PIILGIYQMKIAKKGTTDFKKGNGTGPFVLKSFEPGVKSVHVRNENYWREGPYLDALEIT
AITDPIARTNALIAGDVQIAARVDNKSIRLINQAAGVHVISEPSGQFGGVACLKDTPPGE
NYDFVMGMRYIQDRERIVRSILKGHGQVGNDQPISSAYGKDYCSELPQRGYDPDKAKWHL
KKSGYSSAELFVAPVVSGSEDMAIMMQANLKKIGFDLKVKKVPVDGYWGAVWLKEPLNIT
GWNMRPTANSMLALQLGPGAPWNDTHWHNKRFGELLKLSLAETNPDKRHAMYCEMQTMVH
NESGLVIPCFVNNLDGVSDKLHGIPNQPLGPVGASEWPEFAWLES
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgggaatcaaagtgtttcaaggaatgtatcgagacgggaaaattaatcgtcgtgagttt
atggcggcaatgggcgctttaggactttcggcagcggcttctggcgtactcttgaaatcg
ggtaaagccttggctgcgacaccgcaaaagggcggagtcatcaggatggcatccgacata
catggaccggatgacacgatggatccaattgcccaaacatcaactatcgattacgcgcgg
ggcagggccacctataacaacctgatacaaatcctcgatgacatgtccttgcatcccgaa
ttggcggaagaatggtcatcgaacagcaccgccactgaattcacattcaagattcgcaaa
ggagtgcattttcacgacggatcgcctctaaccgcagatgacgtggtctggagcctgaac
cgccatctcgggaaaaaatcaacatccgtggtcaagctgctcatggaatcggtgagcgag
tggaaaaagatcgacagccataccgtgaaggcggtcttgggtacaccgaacgctgacttg
ccgattattctcggtatctatcaaatgaaaatcgccaaaaagggcactacagactttaaa
aaaggcaatgggaccggcccctttgtactgaaatcctttgagcctggcgtgaaatctgtg
cacgtccgtaacgaaaattactggagagaaggtccctatctggatgcattggaaatcacg
gcgattaccgacccgatcgcccgtaccaatgcgctcattgcaggtgatgtgcaaattgca
gctcgtgttgataacaagtccatccgtcttatcaatcaggctgccggtgtgcatgttata
tcggaaccatcgggacagtttggcggagtcgcctgcctcaaggacacgcctcctggtgag
aactatgatttcgtaatggggatgcggtacatccaggatcgtgagcgtatcgtccggtcc
attctcaagggccatggccaagtgggcaatgaccagccaatatcgtctgcgtatggcaaa
gactattgctctgaattgccgcagcggggatacgaccctgataaggccaagtggcacctc
aaaaagtcaggttattcttccgctgaactttttgtcgcgccagtggtttcgggctctgaa
gatatggctatcatgatgcaggcaaacctgaaaaagatcggtttcgacctcaaggtcaag
aaagtacccgtcgacgggtattggggggccgtctggctgaaagaaccgctgaatatcaca
ggatggaatatgcgtcccacggcgaacagcatgttggcgcttcagttgggcccgggggct
ccgtggaatgacacccattggcacaacaagcggtttggtgaactgctcaaactgtcgctg
gctgaaaccaatcctgataagcgccatgcgatgtactgtgaaatgcagacaatggttcac
aacgagagcggactcgtaattccatgcttcgtgaataaccttgacggtgtcagcgacaag
cttcacggcatacccaatcaacctctgggcccggtgggggcatctgaatggccagaattc
gcctggttggaaagctaa
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