Dickeya zeae: W909_11030
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Entry
W909_11030 CDS
T03567
Symbol
yebU
Name
(GenBank) rRNA methyltransferase
KO
K11392
16S rRNA (cytosine1407-C5)-methyltransferase [EC:
2.1.1.178
]
Organism
dzc
Dickeya zeae
Brite
KEGG Orthology (KO) [BR:
dzc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dzc03009
]
W909_11030 (yebU)
Enzymes [BR:
dzc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.178 16S rRNA (cytosine1407-C5)-methyltransferase
W909_11030 (yebU)
Ribosome biogenesis [BR:
dzc03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
W909_11030 (yebU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
YebU_pre-PUA_dom
Methyltr_RsmF_N
Methyltranf_PUA
Methyltransf_31
Methyltransf_23
PCMT
Methyltransf_25
Cytochrom_B561
GCD14
Motif
Other DBs
NCBI-ProteinID:
AJC66578
LinkDB
All DBs
Position
2441472..2442920
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AA seq
482 aa
AA seq
DB search
MAKPIPASLTPDFLTAMQAIMPAHLSMDDFIDACQRPLRRSIRVNTLKISVPDFLTLVAP
YGWEMEAVPWCHDGFWLLNADEEVMRLGNALEHLSGLFYIQEASSMLPVSALFMEHDSPE
RVLDMAAAPGSKTTQIAAHLNNQGLIVANEYSASRVKVLHANLHRCGVSNTTLTHFDGRV
FGSALPETFDAILLDAPCSGEGVVRKDPAAMSHWSLESIADIAATQRDLILSAFHALKPG
GVLIYSTCTLNHQENQQVCHWLMQQFPGACEIESLKDLFPQAHQALTDEGFLHVFPQIYD
SEGFFVARLRKTASVPPLAPPDYKAGKLPFTPLSNKDAQLICQSARRLGLRWSDQQLQLW
QRDDEIWLFPTALQPMLGKMRFSRIGIKLAERFAKGYRWQHEAIVALGDPQSPNAFVLTA
EQAVDWFRGKDIYPPAFIDHDDILLTWQQTPLGLSKRVGQRLKNTLPRDLVRDGANLVLA
ID
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
gtggctaaacctattcctgcttccctcacccccgattttctgaccgccatgcaagccatc
atgcctgcgcacctgagcatggatgacttcatcgatgcctgccagcggccattacgccgt
agtatccgcgtcaacacattgaaaatcagcgtgcctgattttcttacactggtcgccccc
tacggttgggaaatggaagcagtcccctggtgtcacgacgggttttggctgctcaacgcg
gatgaagaagtcatgcggctgggtaatgcgctcgaacacctgagcggcctgttttacatc
caggaagccagttcgatgctgccagtcagtgcgctgttcatggagcatgattccccagag
cgggtgttggatatggccgccgcccccggttctaaaaccacgcagattgccgcccatctc
aacaatcagggattgattgtcgccaacgaatactccgccagccgggtgaaggttttgcac
gccaacctgcatcgttgtggcgtgagcaataccacgctgacacactttgatggccgggtc
ttcggcagcgccttgccggaaacctttgacgctatcctgctggatgccccttgctctggc
gaaggcgtggtcaggaaagatcctgctgccatgagtcactggtcgctggaaagcatcgct
gatatcgccgccactcaacgcgacctgatactcagcgccttccatgcattgaagccgggc
ggcgtgctgatttactccacctgtaccctgaatcatcaggaaaaccagcaggtgtgccat
tggttaatgcaacaattccccggcgcgtgtgaaatcgagtcgctaaaagacctattccca
caagcgcatcaggctctgacggacgaggggtttctgcacgtcttcccacagatttatgac
agcgaaggtttttttgtggcacgcttgcgtaaaactgcgagcgtaccgccgctggcaccg
ccggattacaaagcgggcaagctgccatttacgccgctcagcaacaaagacgcacaactg
atttgccaaagcgcccgacgtttgggtttgcgatggtcagatcaacagttacaactgtgg
cagcgagacgatgagatctggttgtttccaaccgcactgcaacccatgctgggtaaaatg
cgcttctcccgtatcggcatcaaattggcggagcgttttgccaaagggtatcgctggcag
catgaagccattgtggcgctgggcgacccgcagagcccgaacgccttcgtgcttactgcc
gagcaggccgtggactggttccggggaaaagacatttaccctcccgctttcatcgaccat
gacgacatattattgacctggcagcagaccccgctagggctcagcaaacgtgttggccag
cggctgaaaaacaccctgcctcgcgatctggttcgcgatggtgccaatcttgtgcttgct
atcgattaa
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