Durio zibethinus (durian): 111277004
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Entry
111277004 CDS
T05242
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, chloroplastic-like isoform X1
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111277004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111277004
03016 Transfer RNA biogenesis [BR:
dzi03016
]
111277004
Enzymes [BR:
dzi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
111277004
Messenger RNA biogenesis [BR:
dzi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
111277004
Transfer RNA biogenesis [BR:
dzi03016
]
Prokaryotic type
tRNA degradation factors
111277004
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
Motif
Other DBs
NCBI-GeneID:
111277004
NCBI-ProteinID:
XP_022718817
UniProt:
A0A6P5WT02
LinkDB
All DBs
Position
Unknown
AA seq
946 aa
AA seq
DB search
MLTNPSGVRSTPCYSHPSYFTFSNRCKLLLSPNCPRFLSSKKSSKFCPLSLLLPRNGVPS
NRFAVRALAEPEVSESDAAAADGCGGAGGSCFLQPVSVKIPFGDREILVETGHIGRQASG
SVMATDGETIVYTSVCLSDVPSEPSDFFPLSVNYQERFSAAGRTSGGFFKREGRPRDNEV
LICRLIDRPLRPTMLKGFYHETQLLSWVLSYDGLHSPDALAITAAGIAVAISEVPHSKAI
AGVRVGLLGDKFVVNPTTKEMEDSTLDLFLAGTDGAILMIEGYCDFLSEEKLLEAVQVGQ
DAVRDICTSVESLVKKCGKPKMHDAIKLPPPELYRIVEKIAGDELHKVLQIRSKIPRRKA
ISLLEEKVINTLTDKGYISTEDTPGTVETIQDLLDEEDEDEEIVVDGEVDEGDVHIKPVS
RKSTPLFTEVDVKLVFKDVLSKFLRRHIVEGGKRSDGRSPEGIRPITSRCGLLPRAHGSA
LFTRGETQSLAVVTLGDKQMAQKVDNLANVEEYKRFYLQYSFPPSSVGEVGRMGAPSRRE
IGHGTLAERALEPVLPTEDEFPYTIRVESTITESNGSSSMASVCGGCLALQDAGVPLKCS
IAGIAMGLVLDTEEFGGDGTPLILSDITGAEDASGDMDFKVAGNEDAITAFQMDIKVGGI
TLPIMKEALLQARNGRRRVLAEMMKCSPPPAKGLSKYAPLIHIMKVAPEKVNIIIGSGGK
MVKSIIGETGVEAIDTQDDGIVKITAKDLSSLEKTISIISNLTMVPTVGDIYRNCEIKSI
APYGVFVEIAPGREGLCHISELTSDWLAKAEDAFKVGDHVDVKLIEVNGKGQLRLSRRAL
LPVPETNPEEPSSKQPTGDTAEVIADSDKASDKSTPKKYATDAKADALAEEKIEQVKDKS
SATKLASSPESNSTENTLLPRKKAFKRIRKSSSKAVTGVSGKDVTL
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgctgacaaaccctagcggcgtacgaagcacgccgtgctattctcacccttcgtatttc
actttctccaaccgttgcaaactccttttatctccaaattgccctcgctttcttagttcc
aaaaagtcctctaagttttgccctctctcgctgcttttacccagaaatggcgttcccagt
aaccgctttgccgttagagctttggcggaaccggaagtttccgagtcggatgctgctgct
gccgacggatgtggtggtgctggtggttcctgttttctgcaaccggtttctgttaaaatt
ccttttggagatagagagattctggttgagacaggtcacatagggaggcaagccagcggt
tctgtaatggcaacggatggagaaaccattgtatacacatctgtttgtttgtcagatgtc
ccaagtgagccttctgattttttcccacttagtgttaattatcaagaacgtttttcagca
gcaggtcggactagcggtggtttctttaaacgagaagggaggccaagggataatgaggtt
cttatttgtagactgattgataggcctttgcgtccaactatgcttaagggcttctaccat
gaaactcagttattatcctgggttttgagttatgacggtttgcactccccagatgcttta
gcaattactgcagccggtatagcagtagctatttcagaagtgccacactcaaaagctata
gcaggggttcgagttggtttgcttggtgataaatttgttgtgaatccaacgacaaaggag
atggaagactcaacattagacctatttttggcaggcacagatggtgctatattaatgata
gagggttattgtgattttctatcagaagaaaagttgctggaagcagtacaagttgggcag
gatgcggtgagagatatctgcacctctgtggagtctttggttaagaagtgtgggaaacca
aaaatgcatgatgcaatcaaattgccacctcctgagctttatcggattgtggaaaaaatt
gctggtgatgaattgcataaagtgctgcaaattaggagtaaaataccaagaagaaaggcc
atctcattgttagaagagaaagttattaacacactgacagataaaggctatatcagtaca
gaggatacaccagggactgttgaaacaatccaagacttgcttgatgaggaagatgaggat
gaagaaattgttgttgatggtgaagtagatgaaggtgatgtgcacataaagccggtttct
cgaaaatccactcccttgtttactgaggtggatgtgaagctggtatttaaggatgtttta
tccaaattcttacggagacatattgtggagggaggaaaaagaagcgatgggaggtcccca
gaagggatacgtccaatcacatcaagatgtggattgcttccaagggcccatggaagtgct
ctctttacacgtggggagacacagtcactggcggtggtcacacttggtgataaacaaatg
gcacaaaaagtggacaatctagcaaatgtagaggaatacaagaggttctatcttcagtac
tcatttcctccatcaagtgttggagaggtcggccgaatgggagcacctagtaggagagaa
attggacatggaactcttgcagagagagctcttgagcctgtattgcctaccgaagatgaa
tttccttacaccatacgagttgaaagtaccattactgaaagcaatggttcctcaagcatg
gcatctgtttgtggaggttgcttggcattgcaagatgccggtgttccactaaaatgctct
attgctgggatagcaatgggtttggtattggacacagaagaatttggaggagatggtaca
ccacttattctttctgacattactggagctgaagatgcttctggggatatggattttaag
gttgctggaaatgaagatgccataactgcatttcagatggacataaaggtaggagggata
accttacctattatgaaagaggcactcctacaggcaaggaatggtcgcagacgtgttctt
gctgaaatgatgaaatgttctcctccccctgcaaaaggtctctcaaagtatgctccactt
attcatatcatgaaggttgctccagagaaagttaacattattattggttctggtgggaag
atggtgaaaagcattattggagaaactggagttgaggctattgacacacaagatgatgga
attgtaaaaatcactgcaaaggatttgtcaagtctggagaagaccatatccattattagc
aatctgacaatggttccaactgtcggtgatatttacaggaactgtgagatcaaatcaata
gctccatacggtgtttttgttgagatagctccagggcgtgagggactttgccatattagt
gagctgacttcagactggttggccaaggcagaagatgcttttaaagttggtgatcatgtt
gatgttaaacttattgaggttaatggtaagggacaacttcgccttagccgccgagcactt
cttcctgttcctgaaacaaatccagaggaacccagttcaaagcagcctactggcgacact
gctgaagttattgctgattctgataaagcatctgacaaaagtacacctaaaaaatatgca
accgatgccaaagcagatgctttagctgaagagaagattgaacaagtcaaagataaaagt
agtgctaccaaacttgctagctcacccgaaagtaattctacagagaacactctactgcca
cgaaagaaggcttttaagagaataaggaagagcagcagtaaagctgtcactggtgtctct
ggcaaagatgtgaccttgtga
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