Escherichia coli ABU 83972: ECABU_c13270
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Entry
ECABU_c13270 CDS
T01995
Symbol
ycfS
Name
(GenBank) LysM domain/ErfK/YbiS/YcfS/YnhG family protein
KO
K19236
L,D-transpeptidase YcfS
Organism
eab
Escherichia coli ABU 83972
Pathway
eab01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
eab00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
ECABU_c13270 (ycfS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
eab01002
]
ECABU_c13270 (ycfS)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
eab01011
]
ECABU_c13270 (ycfS)
Peptidases and inhibitors [BR:
eab01002
]
Cysteine peptidases
Family C82
ECABU_c13270 (ycfS)
Peptidoglycan biosynthesis and degradation proteins [BR:
eab01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
ECABU_c13270 (ycfS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
ADN45889
LinkDB
All DBs
Position
complement(1336391..1337350)
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AA seq
319 aa
AA seq
DB search
MIKTRFSRWLTFFTFAAAVALALPAKANTWPLPSADSRLVGENKFHVVENDGGSLEAIAK
KYNVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPREGIVINIAELRLYYYPPGKN
SVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTANIRARYKAQGIELPAVVPAGPD
NPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDDDIKTLFSQVTPGTKVNII
NTPIKISAEPNGARLVEVHQPLSEKIDDDPQLLPITLNSAMQSFKDAAQTDAEVMQHVMD
VRSGMPVDVRRHQVSPQTL
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaacgcgtttttctcgctggctaacgttttttacgttcgccgctgccgtggcg
ctggcgctaccggcaaaagccaacacctggccgctgccgtcagcggacagtcgtctggtt
ggtgaaaacaaatttcatgtggtggaaaatgacggtggttctctggaagcgatcgccaaa
aaatataacgtcggctttctcgctctgttacaggctaaccccggcgttgatccttacgta
ccgcgcgcgggtagcgtgttaacgatcccgttgcaaaccctacttccagacgcgccgcgc
gaaggcattgtgatcaacattgcggagctgcgtctctattattatccgccgggaaaaaat
tcggtaaccgtatatcccatcggcattggtcagttaggtggtgacacgctgacaccgaca
atggtgaccactgtttctgacaagcgtgcaaacccaacctggacgccaacggcaaacatt
cgcgcgcggtataaggcacagggaattgagttgcctgcggtagttccggctggaccggat
aacccaatgggccatcatgcgattcgtctggcggcctatggcggcgtttatttgcttcac
ggtacgaacgctgatttcggcattggcatgcgggtaagttctggctgtattcgtctgcgg
gatgacgatatcaaaacactctttagccaggtcaccccaggcaccaaagtgaatatcatc
aacaccccgattaaaatctctgccgaaccaaacggtgcgcgtctggttgaagtacatcag
ccgctgtcagagaagattgatgacgatccgcagctgctgccaattacgctgaatagcgca
atgcaatcatttaaagatgcagcacaaactgacgctgaagtgatgcaacatgtgatggat
gtccgttccgggatgccggtggatgtccgccgtcatcaagtgagcccacaaactctgtaa
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