Escherichia coli ABU 83972: ECABU_c43040
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Entry
ECABU_c43040 CDS
T01995
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
eab
Escherichia coli ABU 83972
Pathway
eab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECABU_c43040 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eab03019
]
ECABU_c43040 (recQ)
03400 DNA repair and recombination proteins [BR:
eab03400
]
ECABU_c43040 (recQ)
Enzymes [BR:
eab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ECABU_c43040 (recQ)
Messenger RNA biogenesis [BR:
eab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ECABU_c43040 (recQ)
DNA repair and recombination proteins [BR:
eab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ECABU_c43040 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
ADN48723
LinkDB
All DBs
Position
4379115..4380944
Genome browser
AA seq
609 aa
AA seq
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MAQAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIP
ALLLNGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRLLY
IAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMAL
TATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGI
IYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGSTDAQIAL
STIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVYGMGRDKSHEHWVSVIRQLIHLG
LVTQNIAQHSALQLTEAARPVLRGESSLQLAVPRIVALKPKAMQKSFGGNYDRKLFAKLR
KLRKSIADESNVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIR
AHVDGDDEE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggcggaagtgttgaatctggagtccggagctaaacaggttttacaagaaacc
tttggctaccaacagtttcgccccggccaggaagagattatcgacaccgtactttccggt
cgcgattgcctggtcgtcatgcccactggtggcggaaaatccctttgctatcaaatccct
gccttattgctaaacggccttaccgtggttgtctcaccgctgatttcgttgatgaaagat
caggtagatcaactgcaagccaacggcgtggcggcggcgtgccttaactcgacgcaaacc
cgcgagcagcagcttgaagtaatgacaggctgccgcaccgggcaaatccgcctgctttat
atcgcgccggaacgcctgatgctggataactttcttgagcatctggcgcactggaatccg
gtgttattagccgttgatgaagcgcactgtatctcccaatggggtcacgatttccgcccg
gaatacgctgccctcggtcagctgcgtcagcgttttccgacgctcccgtttatggcgctg
actgccacagccgatgacaccacgcgccaggatattgtgcgcctgctggggctgaacgat
ccgctaattcaaatcagcagttttgaccgtccgaatattcgctacatgctgatggagaaa
ttcaaaccgctcgatcagttgatgcgctacgtacaggaacaacgcggtaagtcgggaatt
atctactgcaacagccgcgcaaaagtagaagacaccgctgcacgcctgcaaagcaaggga
attagcgcggcggcctatcatgccgggctggaaaataatgttcgcgctgatgtgcaggaa
aaattccagcgcgatgacctgcaaattgtggtggcgacggtggcgttcggcatgggcatc
aacaagcctaacgttcgcttcgtggtgcattttgatattccgcgcaatatcgaatcctat
tatcaggaaactggacgcgccgggcgtgatggcctgcccgcggaagcgatgctgttttac
gatccggctgatatggcgtggctgcgccgttgtctggaagagaagccgcaggggcagttg
caggatatcgaacgtcataaactcaatgcgatgggcgcgtttgccgaagcgcaaacttgt
cgtcgtttggtattgctgaactattttggcgaagggcgtcaggagccgtgcgggaactgc
gatatctgcctcgatccgccgaaacagtacgacggttcaaccgatgctcagattgccctt
tccaccattggtcgtgtgaatcagcggtttgggatgggttatgtggtggaagtgattcgc
ggtgctaataaccagcgtatccgcgactatggtcatgacaaactgaaagtctatggcatg
ggccgtgataaaagccatgaacattgggtgagcgtgatccgccagctgattcacctcggc
ctggtgacgcaaaatattgcccagcattctgccctacaactgacagaggctgcgcgtccg
gtgctgcgcggcgaatcctctttgcaacttgccgtgccgcgtatcgtggcgctcaaaccg
aaagcgatgcagaaatcgttcggcggcaactatgatcgcaaactgttcgccaaattacgc
aaactgcgtaaatcgattgccgatgaaagcaatgtcccgccgtacgtggtgtttaacgac
gcaaccttgattgagatggcggagcagatgccgatcaccgccagcgaaatgctcagcgtt
aacggcgttggtatgcgcaagctggaacgctttggcaaaccgtttatggcgctgattcgt
gcgcatgtcgatggtgacgacgaagagtag
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