Exiguobacterium alkaliphilum: KB235_06210
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Entry
KB235_06210 CDS
T07307
Name
(GenBank) Fis family transcriptional regulator
KO
K03092
RNA polymerase sigma-54 factor
Organism
eap
Exiguobacterium alkaliphilum
Pathway
eap02020
Two-component system
eap02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
eap00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KB235_06210
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KB235_06210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eap03021
]
KB235_06210
Transcription machinery [BR:
eap03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KB235_06210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
HTH_23
HTH_Tnp_ISL3
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
QUE87774
LinkDB
All DBs
Position
1187137..1188273
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AA seq
378 aa
AA seq
DB search
MQRQEQHQVQRQQLTQDMLRRLPVLEADRAAIVFQLGRLAARSGQVAKGNGMVEWIADAG
AGFEARLFEQIEEGSGTEAEKALQRQLVLALDHRGLLPETDAMLADQFGVEASAIESARR
ALLFLEPTGVGAKNEHECQYRHAIEHDDPLVLDVFEAMEAGVDDVPGRLGLSASEFDRVT
RLIATLPKVPLLYEETEQIFPELEVRREDGQLVTTWFTPALDIEADAELTWWHDTLAMRA
KTLQSIWDVIAERQADWLNGELVLHPLTRKEVAARIGKHESTVGRAIQQKFVRTEGGTMA
WRDLFVRATVRGQSPFMIKRIIAELICSETAPLSDQALTEALANEGYHVTRRTVANYREA
LGFGNSRERERQLWKGES
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgcaacggcaagagcagcatcaagtacaacgacaacaattgacgcaagacatgctacgg
cgcctgcccgtcctagaggcggaccgggccgccatcgtgttccaactcggacggctcgcg
gctcgtagcggacaggtcgccaaagggaacggcatggtcgagtggattgccgacgcgggg
gccggtttcgaggcgcgtctgttcgagcagatcgaggaagggagcgggacggaagcggag
aaggcgctccaacgacagctcgtcctcgcgctcgaccatcgggggctgttgcccgagacg
gatgcgatgctcgcggaccaattcggtgtcgaggcgagcgccatcgagtcagcgcgccgg
gcgctcttgtttctagaaccgacgggcgtcggagcgaaaaacgaacacgaatgccaatat
cgacacgccatcgaacacgacgacccgctcgtcttggacgtgttcgaggcgatggaggcg
ggcgtcgacgatgtcccgggccgcctcgggttgagtgcgtccgaattcgatcgcgtcacg
cgcctcatcgcgacgttgccgaaagtgccactattatatgaagaaaccgaacaaattttc
ccagagctcgaagtgagacgggaggacggacagctcgtcacgacgtggttcacgccggca
ctcgacatcgaggcggacgcagagctgacgtggtggcacgacacgctcgcgatgcgggcg
aagacgttgcagtcgatttgggacgtcatcgcggaacggcaggcggactggttgaacggg
gagctcgtattacacccgttgacacgaaaagaagtcgccgcgcgtatcggtaaacatgag
tcgacggtcgggcgggcgattcaacagaagtttgtccgcaccgagggcggcacgatggca
tggcgtgatttgttcgtgcgggcgaccgtgcggggacagtcgccgttcatgatcaaacgc
atcatcgccgagctgatttgttccgagacggcaccgcttagtgatcaggcgttgaccgag
gcgctcgcgaacgaagggtatcacgtgacgcgacggacggtcgccaactatcgggaagcg
ctcggtttcggcaactcgcgggaacgggagcggcaactatggaaaggagagagttga
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