Escherichia coli BL21-Gold(DE3)pLysS AG: ECBD_1588
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Entry
ECBD_1588 CDS
T00939
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
KO
K21084
diguanylate cyclase [EC:
2.7.7.65
]
Organism
ebd
Escherichia coli BL21-Gold(DE3)pLysS AG
Pathway
ebd02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
ebd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
ECBD_1588
Enzymes [BR:
ebd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
ECBD_1588
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
MASE1
PAS_3
PAS_4
PAS
PAS_9
EAL
PAS_8
Motif
Other DBs
NCBI-ProteinID:
ACT28647
UniProt:
A0A140N5R5
LinkDB
All DBs
Position
complement(1694218..1697535)
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AA seq
1105 aa
AA seq
DB search
MSKQSQHVLIALPHPLLHLVSLGLVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRH
AGRMWPGIALSCSLGNIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQN
LADWLRLALGSAIVPPLLGGVLVVLLTPGDDPLRAFLIWVLSESIGALALVPLGLLFKPH
YLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFL
TTVMMVSLMMAADPSLLATPRTYLMTHMPWLPFLLILLPANIMTMVMYAFRAERKHISES
ETRFRNAMEYSAIGMALVGTEGQWLQSNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDL
QQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRT
EQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVL
PEDRQHAEKVIRDSLQSRSPFKLEFRIAVKDGIRHIRALANRVLNKEGEVERLLGINMDM
TEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPL
LTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIG
SVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFID
LDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFI
ATRIISAVNDYHFIWEGRVHQVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRV
TVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCE
GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLV
NDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQKLRLAGCRIVLSQVGRDLQIFNSLKA
NMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVD
LIYGEVIADAQPLDLLVNSSYFAIN
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacaatcacagcatgtattaattgccctgccccacccgctgcttcacctggtc
agtttaggtttagtctcgtttatctttacccttttctcgcttgagctttcgcagtttggc
acccaactcgccccactgtggttcccgacgtccatcatgatggtggcgttttatcgccat
gccgggcgcatgtggccgggaattgcgctgagctgttcgctgggaaatatcgccgcatcc
atcctgcttttttccaccagctcgctgaacatgacctggacgaccatcaatattgttgaa
gccgtggtcggggcagtgctgctacgtaaattgctgccgtggtataaccccttgcaaaat
ctggctgactggctgcgtctggcactcggcagcgccattgttccacctctgttggggggt
gttctggttgtcctgctgacgcccggagacgatcctctcagggcatttttgatatgggta
ctgtcagaatccatcggcgctctggcactggtgccgctgggattgttatttaaaccacac
tatctgctgcgccatcgcaacccacggttgctttttgagtcgctgctcacattagccatc
acactgacgttaagctggctttcgatgctgtatctgccgtggccttttactttcattatt
gtgctgttgatgtggagcgccgtgcgcctgccacgaatggaagcctttttgatcttcctt
accacggtgatgatggtgtcgctgatgatggccgcggatccctccctgcttgctacgccg
cgtacgtacctgatgacccatatgccgtggctaccgtttttgctgatcctgctgcccgcc
aacatcatgacgatggtgatgtatgcctttcgtgcggaacgcaaacacatttccgaaagc
gaaacccgttttcggaacgcgatggaatattccgccatcggcatggcattagtgggcacc
gagggacaatggctgcaatccaacaaagcactctgccagtttctcggttacagtcaggaa
gagctgcgcggactcacctttcagcaactgacctggccggaggatctcaataaagatctc
caacaggttgaaaagctgataagcggtgaaataaacacctattcaatggaaaaacgttac
tacaaccgcaatggcgatgttgtctgggcgttgcttgccgtctcactggtgcgccacacg
gatggcacgccgctctattttatcgctcagattgaagacattaacgagctaaaacgcacc
gaacaggtgaatcagcaactgatggaacgcatcacgctggctaacgaagcgggcgggatt
ggcatctgggagtgggagttgaagccgaatatttttagctgggataagcggatgttcgag
ctgtatgaaattcctccgcatatcaaaccgaactggcaggtgtggtacgagtgcgtgctg
ccggaagatcgccagcatgccgaaaaagtgattcgtgattcgttgcaatcacgctcgccc
tttaagctggaatttcgcattgccgtgaaagatggcatccgccatatccgcgccctcgcc
aaccgggtactgaataaagaaggcgaagtcgaacgcctgctcggcattaatatggatatg
actgaggttaaacagcttaacgaggcattgtttcaggaaaaagagcgcctgcacattacg
cttgattccatcggtgaagccgtggtctgtattgatatggcgatgaaaattacctttatg
aatccagtggcggagaagatgagcggctggacgcaggaagaagcgttaggtgttccgctc
ctgacggtgttgcatattacttttggcgacaacggaccattaatggagaacatttacagt
gccgacacctcacgttccgcgatcgaacaagatgtggtgttgcactgtcggagcggcggc
agttacgacgtgcattacagtattacgccgttaagtactctggacggcagcaatattggt
tcggttctggtgattcaggacgttaccgaatcacgcaaaatgctgcgccagctgagctac
agcgcctcccatgatgcactgacgcatctcgccaaccgcgccagttttgagaaacaactg
cgtatcctgctgcaaacggtaaacagtacgcatcagcgacatgcactggtgtttatcgat
cttgatcgctttaaagcggtgaatgacagcgccgggcatgcggcgggcgacgctttgctg
cgcgaactggcgtcgttgatgctgagtatgctgcgctccagtgacgtgctggcgcggctc
ggcggtgatgaatttggtctgctgctgccagactgcaatgttgaaagcgctcgttttatc
gctacacgtattatcagtgctgtgaatgactatcactttatatgggaaggccgtgtgcat
caggtaggtgccagtgccgggattaccttgattgatgacaacaatcatcaggcggcagaa
gtgatgtcgcaggctgatatcgcctgttatgcctccaaaaatggtggccggggccgggtg
acggtttacgaaccgcagcaagctgccgcacatagcgaacgggcggcgatgtcgcttgat
gaacagtggcggatgattaaagagaatcagttgatgatgctcgcccacggtgtcgcttcg
ccacggatcccggaagcgcgtaatttgtggctgatttcacttaagctctggagttgcgaa
ggcgagattattgatgaacaaacatttcgtcgtagcttcagcgatccggcgcttagccat
gctcttgaccgccgggtattccacgaatttttccagcaggccgcaaaagcggttgccagt
aaaggcataagcatctccctccccctttccgttgccggtttgagtagcgccacgctggtg
aatgatctgcttgagcagctggaaaatagccctctaccaccacggttattacatctgatt
attccggctgaagcgattttagatcacgcagaaagcgtgcaaaaactgcggctggcggga
tgtcggatagtgctcagccaggtgggccgcgatctgcaaatcttcaactcgctgaaagcg
aatatggcagattacctgctacttgatggtgagttatgcgccaacgtgcagggtaatttg
atggatgagatgctgattacgattattcaggggcacgctcagcgactcgggatgaaaacc
atcgccgggccagtcgttttacccttagtgatggatacgctttctggcatcggcgtcgat
ctgatttatggtgaggtgattgccgatgcccaaccgctggatttgctggtgaatagcagt
tatttcgcgattaactga
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integrated database retrieval system
