Escherichia coli BL21(DE3): ECD_01318
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Entry
ECD_01318 CDS
T00931
Symbol
ydaM
Name
(GenBank) diguanylate cyclase, csgD regulator
KO
K21088
diguanylate cyclase [EC:
2.7.7.65
]
Organism
ebl
Escherichia coli BL21(DE3)
Pathway
ebl02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
ebl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
ECD_01318 (ydaM)
Enzymes [BR:
ebl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
ECD_01318 (ydaM)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
PAS_4
PAS_9
PAS_8
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
ACT43204
LinkDB
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Position
complement(1391731..1392963)
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AA seq
410 aa
AA seq
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MITHNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPK
YLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRS
ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN
MLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVYDIT
EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND
LYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVA
KVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgattacgcacaacttcaataccctggacttactcaccagtcctgtctggatcgtttcg
ccctttgaggaacagttaatttatgccaatagcgcggcgaaactgttgatgcaagacctc
acgtttagtcagctacgaaccggaccctattccgtctcctcacaaaaagaactgccgaaa
tacctctccgatctgcaaaaccaacacgatattatcgaaatcctcactgttcagcgtaaa
gaagaggaaacagcattgagctgtcggcttgttttgcgaaagctgacagaaacagaaccg
gtgattattttcgaaggtatcgaagcgccggcaacgctgggtttaaaagccagtcgctcg
gcaaattatcagcgcaaaaaacaaggtttttatgcgcgcttttttctgactaactctgca
ccaatgttgttgattgacccgtcacgagatggacaaatcgtcgatgctaacctcgccgcg
ctcaatttctatggttataaccatgaaacgatgtgccagaaacatacctgggaaataaat
atgctcgggcgtcgcgtcatgcctatcatgcatgaaatctcgcatttacccggtggtcat
aaacctttgaattttgttcataaactggcggatggttcgactcgtcatgtgcagacctat
gccggaccgattgaaatttatggcgacaagctcatgttatgtattgtgtatgatattact
gagcaaaaacggctggaggagcagctggaacatgctgctcaccatgacgcgatgaccgga
ttactgaatcggcgacagttttatcacattacggaaccaggccaaatgcagcatctcgcc
atcgctcaggattacagcttgttgctcatcgacaccgatcgttttaaacacattaacgat
ctctatgggcattctaaaggtgatgaggtgttatgcgccctcgcccgcaccctcgaaagt
tgcgctcgcaaaggcgatttggtgtttcgttggggaggcgaagagtttgtcttattgcta
ccaagaaccccactggataccgcgctttcgctggctgaaactatccgcgtaagcgtggca
aaagtgagtatttcgggcttaccacgctttaccgtcagcattggtgtggcgcatcacgaa
ggaaatgaaagcatcgatgaactgtttaaacgcgttgatgatgctttgtatcgggcgaaa
aatgatggacgcaaccgcgtgctggcggcataa
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