Enterococcus casseliflavus: ECBG_01418
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Entry
ECBG_01418 CDS
T02623
Name
(GenBank) tRNA pseudouridine(38-40) synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ecas
Enterococcus casseliflavus
Brite
KEGG Orthology (KO) [BR:
ecas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecas03016
]
ECBG_01418
Enzymes [BR:
ecas01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
ECBG_01418
Transfer RNA biogenesis [BR:
ecas03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ECBG_01418
Prokaryotic type
ECBG_01418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Glycos_transf_3
DUF2344
Motif
Other DBs
NCBI-GeneID:
15140868
NCBI-ProteinID:
EEV39149
UniProt:
C9A9I8
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All DBs
Position
269573..270319
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AA seq
248 aa
AA seq
DB search
MVRYKATIAYDGTNFQGFQRQPNGRTVQEEIEKTLTKMNNGQPIQIHGSGRTDAGVHAQG
QVIHFDFPQKRPLEKMRFGLDTQTPEDVAVKAVEIVDDTFHARYLVVEKTYQFRVDIGKP
RSPFRRHYASYYPYPLDLEKIQRALPDFLGTHDFTSFCATGSSVDDKTRTIHEASMAVND
AGDELIFTFRGDGFLYKMIRIMVGTLLKIGNGRLAPDSIPAIIAQKDRNAAGPTAHPEGL
YLVHVAYE
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggtccgctataaagcgacgatcgcttatgatggcacgaattttcaaggatttcagcgt
caacccaatggacgaacggttcaagaagagattgaaaagacattaacgaagatgaacaat
gggcagccgattcagattcatggctctgggcgcaccgatgcgggtgtccatgcgcaagga
caagtgatccacttcgatttccctcaaaagcgcccactggaaaaaatgcgctttggttta
gatacccaaacgccagaagatgttgcggtaaaagcggtggaaatcgttgacgataccttc
catgcccgctacttagtcgttgaaaaaacctaccagtttcgagtagacattgggaaacct
cgcagtcctttccgccgccattatgccagctattatccgtatccgctagatttggaaaaa
atccaacgagcgttgccagattttttaggcacccatgactttaccagtttttgtgcgacg
ggcagttccgtcgatgacaaaacacggacgatccatgaggcgtccatggcggtcaatgac
gctggagatgagttgattttcacctttcgcggcgatggatttttgtacaagatgatccga
atcatggtgggcacattgttgaaaatcggcaatggacgactcgcacctgacagtattcct
gcgatcattgcgcaaaaagaccgaaatgcagcaggtcccacagctcatccagaaggattg
tatttggttcacgttgcctatgaataa
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