Equus caballus (horse): 100069920
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Entry
100069920 CDS
T01058
Symbol
NWD1
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT domain- and WD repeat-containing protein 1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ecb04990
]
100069920 (NWD1)
Domain-containing proteins not elsewhere classified [BR:
ecb04990
]
WD40 repeat (WDR) domain-containing proteins
Other WDR domain-containing proteins
100069920 (NWD1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
NACHT
AAA_16
Nucleoporin_N
AAA_22
DUF4062
AAA
Motif
Other DBs
NCBI-GeneID:
100069920
NCBI-ProteinID:
XP_023481145
LinkDB
All DBs
Position
21:2526022..2594939
Genome browser
AA seq
1563 aa
AA seq
DB search
MQREKLCRAPPTPRCXTFCQKHGLMFEVVDLRWGVRSAEATEHMTTELCLEELDRCRKTS
IGPAFVALMGNQYGPCPVPALIEEKEWEALQAQLAARPGDLELVAQRFRRDENAVPPAYV
LQAPGAREASEPEDALASVLCSGARDARRLGLLTQEQWHRYSRSVIEWEIERGLLSSADG
DQGATVFLREIPDLDKHILEECALKMVDRLADGCLDTDAQNLLSSLKGRIADTQPGVLKA
HHLPWSRDLVNPQNKAHARYLKELGEQFVARANHQVLERLRELEAGRQELAWLHQEVRHH
LGLSTEATRAFCGRQELLTQLGQHLRESDSHPHTALVLFGAPGIGKTALMCQLGQQMPGL
LGRKTVTVLRLLGTSQMSSDAHGLLQSVCFQVCLAYGLPLPPAQVLEAHARLVQFFHILL
HTVSSRNFESLVILLDSVDDVDSVHRARRVPWLPPNCPPRVHLILSACLGQQGALETVQQ
TLTDPGAYWEVRPLSGNQGQEMLQLLMAASRRTLSAGQTELLWASLPECGHPGRLRLAFE
EARSWASFTVPAPLAPTAGEAMQQLCARLEQTHGQLLVAHVLGYIVSSRHGLSEAELKDV
LSLDDEVLQAVYWDWTPPSKELLRFPPLLWVRLRRDLGNCLARRPVDGFTLLAIAHRQLA
EVVRERYLSGPERARRHGVLADFFSGAWSQGTKKLITLPLVGKPLNLDRKAAPQPLWFSD
TIANLRKLKELPHHLLHAGRLEELQREVLGSMNWITCRAVSGGIEALLDDFDMCAPHLDC
PELGLVREALQLCRPALELRGLEKSILYTELLARLHFFAASHPVLVGQLCQQAQSWFRAC
PHPVLVPLRGFLQPPGGPLRATLTGCHKGITALAWSPEEKLLVVGTQDGIVAVWDMEEQQ
VIHFLPGHRGEVRCLKVLAKGTCAISASKDHTLRLWNLLSGREKFTIWDRGSKDPPEPQI
CSLHADEIKKLVYLASGAKVSAWNLETAELVFRILGDASDPWKCTAALAPQAVLLAVSEA
GLVSLWSSATGRLQRKQRLSSIREETPTCGVLVQKQGKMVTGFSQGSLSLVSSEGDVLLE
KLPEAVGFLVVSEDESLLAAGFGSSVRIFLADSQGFHRFMATDLEHEDTVETAIFGPENN
LIVTGSRDALIQVWSLSEQGTLLDILEGVGAPVSLLARAGALVASASQQSSSFKVWDLSY
AQKPRASAPFLDRTGLTAVSHDGGYVYFPKIGDKNKVTVWDVAEGEEREALDTSNEVRCL
EVAEQAKLLFTGLVSGVVLVFPLNSRQDVMCIPPPEAGKAINYMALSKDEERLAVAYDSL
VLVLDISPGDPCPVIGGPTYTFYTQLPETIASVAVLADYRVLYGMTNGGLFLYECATSKV
FPLEAHGSRVACVEVSHKGQLAVSGCEEALLCLWDLQACKGKFEMSYTNSYCQGVQCACF
SKDDKYVFVGLKDRSVIVWSVLDGALLAVQFVHAVVNRIIPTSDGFIAPARHGYLIRERF
QCPSSRASQQDPLRNFKKAVWMVKSRQRGELAAAAGALQDSGSGSAQGNQSKSNKRSQVC
LIV
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atgcagagagagaagctctgcagagcgccgcctaccccgaggtgcnagactttctgccag
aagcacggcctgatgttcgaggttgttgatctgaggtggggtgttcgcagtgccgaggcc
actgaacacatgaccacggaactctgcttggaggagctggaccggtgtcggaaaacatcc
atagggccggcttttgttgccctcatggggaaccagtacgggccctgtccggtccccgcg
ctcatcgaggagaaggagtgggaggcgctgcaggctcagctggccgccaggcccggcgac
ctggagctggtggcccaacgcttccggagggacgagaacgccgtgccccctgcctacgtg
ctgcaggcgccgggcgccagggaggccagtgagcccgaggatgccctggcctcggtgctg
tgctccggagcccgggacgcacggaggctgggcctcctcacgcaggagcagtggcaccgc
tactcccgctcagtcattgagtgggagatagaacgaggcctgctgagctcggcagacggg
gaccagggcgccaccgtcttcctgagagagatcccagacctcgacaaacacatcctggag
gagtgtgccctcaagatggtggaccggctcgcagatggctgcctggacacagatgcccag
aacctcctcagcagcctcaaggggcgcatcgccgacacgcagcccggagtcctcaaggcc
caccacctgccctggagccgtgacctggtgaacccccagaacaaggctcatgcccggtac
ctgaaggagctgggcgagcagtttgtggcccgggctaaccaccaggtcctggaacgcctc
cgggagctggaggcgggcaggcaggagctggcatggctccaccaggaggtccgccaccac
ctggggctgagcaccgaggccacccgcgccttctgcgggcgccaggagctcctgacgcag
ctgggacagcacctgcgggagagcgacagccacccacacacggccctggtgctttttggg
gccccgggcattggaaagacggctctgatgtgccagctgggccagcaaatgccagggctg
cttggccgcaagacagtgaccgtcctgcggctgctggggacctcgcagatgagctccgac
gcccatggcctgctccagagcgtctgcttccaggtgtgcctggcctacgggctgcccctg
ccccctgcccaggtcctggaggcccatgccaggctggtccagtttttccacatcctcctc
cacaccgtctccagccgaaacttcgagtccctcgtgatcctgctggattccgtggatgat
gtggactccgtccaccgtgctcggagggtcccctggctgcctcctaactgccccccgagg
gtccacctcatcctttcggcctgcttggggcagcagggggctctagagaccgtgcagcag
acgctcacagacccaggggcctactgggaggtcagacccctctcgggaaatcaggggcaa
gagatgctccagctgctgatggcggcctcgaggaggaccctgagcgcgggacagacggag
ctgctgtgggccagcctcccagagtgcgggcacccagggcggctgaggctggccttcgag
gaggcccggagctgggcctccttcaccgtgcccgcccctctggcccccacggccggggaa
gccatgcagcagctgtgcgcccgcctggagcagacgcatgggcagctcctggtggcccat
gtcctgggctacatcgtgtcttccaggcacgggctctcggaggcagagctgaaggacgtc
ctgtccttggatgacgaggtcctgcaggccgtgtactgggactggaccccacccagcaag
gagctgctgcgtttcccacccctgctctgggtgaggcttcgtcgagatctgggtaactgc
ttggccaggcggccagtggatggcttcacgctcctggccatcgcccatagacagctggcc
gaggtggtccgagagcgctacctgtccgggcccgagagagccaggagacacggagtcttg
gcggacttcttctcgggggcctggagtcagggcaccaagaaactcatcaccctgccgctc
gtggggaaacccttgaacctggaccgcaaggcggcccctcagcccctgtggttctcggac
acgattgcgaacctgcggaagctgaaggagttaccgcatcacctgctccacgcaggccgc
ctggaggagctgcagcgggaggtgctgggcagcatgaactggatcacctgcagagccgtc
tcggggggcatcgaggctctgctggacgactttgacatgtgcgcccctcacctggactgt
cccgagctgggcctggtccgggaggccctgcagctgtgccgcccggccctggagctccga
ggcctggagaaaagcatcctgtatacagaactcctggccagactccatttctttgctgcc
tcgcatcccgtactcgtgggacagctgtgccaacaggcccagagctggttccgggcgtgc
ccacaccctgtgctggtgcccctccggggattcctccagcccccaggaggacccctccgg
gcgaccctcactggctgtcacaaaggcatcaccgccttggcgtggagcccggaagagaag
ctgctggtggtcggcacccaggatggcatcgtggctgtgtgggacatggaggaacagcag
gtgatccacttcctacctggacacagaggagaggtgaggtgcctgaaagtgttggccaaa
gggacgtgcgccatctccgcctcgaaggaccacacgctgcgcttgtggaatttactctcc
ggccgggagaaattcaccatttgggacagaggctcaaaagatccccccgaacctcagatc
tgcagcctgcacgcggatgagataaagaagcttgtgtatttggcgtctggcgcaaaggtc
agtgcttggaatctggaaactgcagagctggttttccgcatcctaggagatgcctccgac
ccctggaagtgcacggcggcgctggctccccaggccgtgctgctggcggtgtctgaggct
ggcctggtcagtctgtggagctcagccacgggaagactgcagaggaagcaacgtttgtcc
agcatcagagaggagacgcccacctgtggcgtcttggtccagaaacaggggaagatggtg
actggctttagccagggctccctctctttggtttcctccgaaggagacgttctgctggag
aagcttccggaagctgtggggttcctggtggtctctgaagatgagtcccttctcgcagca
ggctttggaagctccgtgcgaatattcttggctgactcacaggggtttcatcgattcatg
gccaccgaccttgaacatgaggacacagtggagacagccatttttggtcctgagaacaat
ctcattgtcactgggtcccgggacgcactcattcaggtgtggagtctgtcagagcagggg
accctgctggacatcctggaaggcgtcggagcccctgtgagcctgctggcccgggctggg
gccttggtggcatctgcttcccagcagtcctcatcttttaaagtctgggatctcagctac
gctcagaagccacgggcctctgcgccgttcctggaccgcaccggcctcaccgcggtgtca
cacgatggcggctacgtttacttccccaagattggggacaaaaacaaagtcaccgtttgg
gatgtggcagaaggtgaggaacgagaggccctggacacctccaatgaggtcaggtgcctg
gaggtcgccgagcaagccaagcttctcttcaccggcctcgtttccggggtcgtcctggtg
ttccccctgaattccagacaggacgtgatgtgcatcccccctccggaggccgggaaagcc
atcaactacatggccctgagtaaggatgaggagcgcctggccgtcgcctacgacagcctg
gtcttggtgctggacatcagccccggggacccctgtccggtcatcggcgggccaacctac
accttctacacccagctgcctgagaccatagccagtgtggccgtgctggccgactaccgc
gtgctctacggcatgaccaacggcggcctcttcctttacgagtgtgcaacttccaaagtg
ttccctctggaggcgcatgggagccgggtcgcctgcgtggaggtcagccacaaggggcag
ctggcagtcagcgggtgcgaggaagcgctgctgtgtctctgggacctgcaggcctgcaag
gggaagttcgagatgagctacacgaattcttactgccaaggcgtccagtgtgcctgcttc
tccaaggatgacaagtatgtgtttgtcggcttgaaggatcgctccgtgattgtctggagt
gtgctggatggcgctctcctggctgtccagtttgtccatgccgtggtgaacagaatcatc
cccacttccgatggcttcattgcccctgccagacacggctatctcatccgtgagcggttc
cagtgcccttcctcaagggcctcgcagcaggaccctctcaggaacttcaagaaggccgtg
tggatggtcaaatccaggcagagaggagagctggctgctgctgcaggagcgctccaggac
tcgggatcagggagtgcgcagggaaaccagtccaaatcaaacaaacgctcacaagtctgc
ctgatagtgtag
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integrated database retrieval system
