Escherichia coli K-12 W3110: JW5894
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Entry
JW5894 CDS
T00068
Symbol
cynR
Name
(GenBank) DNA-binding transcriptional dual regulator
KO
K11921
LysR family transcriptional regulator, cyn operon transcriptional activator
Organism
ecj
Escherichia coli K-12 W3110
Brite
KEGG Orthology (KO) [BR:
ecj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecj03000
]
JW5894 (cynR)
Transcription factors [BR:
ecj03000
]
Prokaryotic type
Helix-turn-helix
LysR family
JW5894 (cynR)
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
PBP_like_2
HTH_5
P22_Cro
Motif
Other DBs
NCBI-ProteinID:
BAE76120
UniProt:
P27111
Structure
PDB
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All DBs
Position
complement(357015..357914)
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AA seq
299 aa
AA seq
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MLSRHINYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLGVPLFDRSGRTIRLTDA
GEVWRQYASRALQELGAGKRAIHDVADLTRGSLRIAVTPTFTSYFIGPLMADFYARYPSI
TLQLQEMSQEKIEDMLCRDELDVGIAFAPVHSPELEAIPLLTESLALVVAQHHPLAVHEQ
VALSRLHDEKLVLLSAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELIRRTSLSTLL
PAAIATQHDGLKAISLAPPLLERTAVLLRRKNSWQTAAAKAFLHMALDKCAVVGGNESR
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgctctctcgacatatcaattattttcttgccgtggctgaacatggcagcttcacccgt
gccgccagtgcgttgcacgtctcccaacctgcgctttcccagcagattcgccagttagag
gagagtttaggcgtgccgctgtttgaccgtagcgggcgaacgattcgtctcactgatgca
ggagaagtctggcgacagtacgccagccgggcgttacaggaactgggggcgggtaaacgg
gcgattcatgatgttgccgatctgacgcgaggatcgctgcgtatcgccgtcacccccacc
tttacgagctactttatcggccccttaatggcggatttctatgcgcgctatcccagcatc
acgctccagctacaggaaatgtcgcaggagaaaatcgaggatatgctttgccgcgacgag
ttggacgttgggattgccttcgcgcctgtgcattcgccggagctggaggcaattccttta
ctgacagaaagtttagcgttagtcgtggcgcaacatcatccgctggccgtccatgaacag
gtggcgttgagtcgcttgcatgatgaaaaactggtcctgctcagcgcggaatttgccacc
agagagcaaattgaccactactgcgagaaagcggggctacatccacaggtggtcattgag
gcgaactcaattagcgcggttctggagctgattcgccgcacttccctttccacattgtta
ccagcagcgattgccacacaacatgacgggcttaaagctatttctcttgccccgccacta
ctggagagaacggcggttttgttgcggcggaaaaatagctggcagacagccgccgcgaag
gcatttttgcacatggcgttggataaatgcgcggttgttggcggaaatgaatcacggtag
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