Escherichia coli 55989 (EAEC): EC55989_2137
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Entry
EC55989_2137 CDS
T00826
Symbol
sdiA
Name
(GenBank) DNA-binding transcriptional activator
KO
K07782
LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
Organism
eck
Escherichia coli 55989 (EAEC)
Pathway
eck02020
Two-component system
eck02024
Quorum sensing
eck02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
eck00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EC55989_2137 (sdiA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EC55989_2137 (sdiA)
02026 Biofilm formation - Escherichia coli
EC55989_2137 (sdiA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eck03000
]
EC55989_2137 (sdiA)
Transcription factors [BR:
eck03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
EC55989_2137 (sdiA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
HTH_20
Sigma70_r4
HTH_10
HTH_23
Motif
Other DBs
NCBI-ProteinID:
CAU98011
UniProt:
B7L8S9
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All DBs
Position
complement(2182035..2182757)
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AA seq
240 aa
AA seq
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MQDKDFFSWRRTMLLRFQRMEAAEEVYHEIEFQAQQLEYDYYSLCVRHPVPFTRPKVAFY
TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVT
QYLMLPNRALGFLSFSRSSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF
SKREKEILKWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgcaggataaggattttttcagctggcgtcgcacgatgctgttgcgttttcagaggatg
gaggccgcagaagaggtctaccatgaaatagagtttcaggctcagcagctggagtacgat
tactattcgttatgtgttcgccacccggtaccattcacgcgacctaaagtggctttctac
accaattaccctgaggcgtgggttagttattatcaggcaaaaaactttctcgcaattgat
ccggtgctgaaccctgaaaactttagtcagggccatttaatgtggaatgatgacttattc
agcgaagcacagccgttatgggaagccgcgcgcgcacatggtttacgccgcggtgtcact
cagtatttaatgctgccaaaccgggcgctgggctttttgtccttttcccgtagcagcgcg
cgcgaaatacccattcttagtgatgaactgcaattaaaaatgcagttactggtgcgcgaa
agtctgatggctctgatgcgtttaaatgatgaaatagtgatgacgccagagatgaatttc
agcaagcgcgaaaaagaaattttgaaatggacggcggaagggaagacatcagcagagata
gcgatgattttgtcaatctctgagaatacggtcaatttccaccagaaaaacatgcagaaa
aaaattaatgcaccaaataagacgcaggttgcctgttacgcggccgctactggcttaatt
tga
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