Enterobacter cloacae GGT036: EC036_16720
Help
Entry
EC036_16720 CDS
T03429
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
eclg
Enterobacter cloacae GGT036
Pathway
eclg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
eclg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EC036_16720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eclg03400
]
EC036_16720
Enzymes [BR:
eclg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EC036_16720
DNA repair and recombination proteins [BR:
eclg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
EC036_16720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRCF
DEAD
UvrB_inter
MFD_D3
Helicase_C
CarD_TRCF_RID
ResIII
UB2H
ERCC3_RAD25_C
RecG_dom3_C
Motif
Other DBs
NCBI-ProteinID:
AIV29319
LinkDB
All DBs
Position
complement(1812612..1816058)
Genome browser
AA seq
1148 aa
AA seq
DB search
MPEHYRYSLPVKAGDQRQLGELTGAACATLVAEIAERHPGPVVLVAPDMQNALRLHDEIR
QFTDNLVFSLADWETLPYDSFSPHQEIISSRLSTLYQLPTMQRGVLIVPVNTLMQRVCPH
SYLHGHALVMKKGQRLSRDDLRAQLDSAGYRHVDQVMEHGEYATRGALLDLYPMGSDQPY
RLDFFDDEIDSLRVFDADTQRTLEEVEAINLLPAHEFPTDKTAIELFRSQWRDKFDVKRD
AEHIYQQVSKGTLPAGIEYWQPLFFNGPLPALFSYFPANTLIVNTGDIDASASRFESETR
ARFENRGVDPMRPLLPPEALWLRTDELNAELKRWPRVQLKTDTLADKAANTNLAFQKLPD
LAVQAQQKSPLESLRKFLDAFTGPVVFSVESEGRREALGELLGRIKVAPKRILRLSEATG
TGRYLMIGAAEHGFIDTLNNVALICESDLLGERVARRRQDSRRTINPDTLIRNLAELHPG
QPIVHLEHGVGRYQGMTTLEAGGIKGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEENA
PLHKLGGDAWARARQKAAEKVRDVAAELLDIYAQRAAKEGFAFKHDKEQYQLFCDSFPFE
TTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVENNKQVAVLVPTTL
LAQQHFDNFRDRFANWPVRIEMLSRFRSTKEQTQILEQASEGKIDILIGTHKLLQSDVKW
KDLGLLIVDEEHRFGVRHKERIKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPP
ARRLAVKTFVREYDNLVVREAILREVLRGGQVYYLYNDVENIQKAADRLAELVPEARIAI
GHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLR
GRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLG
EDQSGSMETIGFSLYMELLENAVDALKAGREPSLEDLTSQQTEVELRMPSLLPDDFIPDV
NTRLSFYKRIASAKNENELEEIKVELIDRFGLLPDAARNLLDIARLRQQAQKLGIRKLEG
NEKGGVIEFAEKNHVNPTWLIGLLQKQPQHFRLDGPTRLKFTQELTERKTRMDWVRNFMR
QLEENAIA
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacactatcgttattccctgcctgttaaagcgggcgaccagcgccagctgggc
gaactcactggcgctgcgtgcgccacgctggtggcagaaatcgctgagcgacatcctggt
ccggtggtgctggtcgccccggatatgcaaaatgcgctgcgactgcatgatgaaattcgc
cagttcaccgataacctggtcttcagtctggccgactgggaaacgctgccgtatgacagc
ttctccccgcatcaggagatcatctcctcgcgcctgtcgaccctctatcagttaccgacc
atgcagcgcggcgtgctgatcgttccggtcaacaccctgatgcagcgcgtctgtcctcac
agctatttgcacggccatgcgctggtgatgaaaaaaggtcagcgcctgtcccgggacgat
ctgcgcgcgcaactggacagcgccggataccgtcatgtcgatcaggttatggagcacggg
gaatacgccacgcgcggtgcgttgctcgacctgtacccgatgggcagcgaccagccgtat
cgactggacttcttcgacgatgagatcgacagcctgcgcgtattcgacgccgacacgcag
cgcacgctggaagaagtggaagccatcaatttattacccgcccatgaattcccgacggac
aaaaccgctatcgagctgttccgcagccagtggcgcgacaagttcgacgttaagcgcgac
gctgagcatatctatcagcaggtcagcaaaggtacgcttcctgccgggatcgaatactgg
cagccgctgttctttaacgggccattgcccgctctgttcagctacttcccggcgaacacg
ttgattgtcaacaccggtgatatcgacgccagcgccagccgctttgagagcgaaacccgc
gcgcgctttgaaaaccggggcgtagacccgatgcgtccgctgctgccacctgaagcgctg
tggctgcgcaccgacgagctcaacgccgaactcaagcgctggccgcgcgtacagctgaaa
accgatacgcttgccgataaagctgccaacaccaatcttgcattccagaagctgccagat
ttagccgttcaggcacagcagaaatccccgctggagagtctgcgcaagttcctcgatgcc
tttaccggcccggttgtcttctccgttgagagtgaaggccgccgtgaagcgctgggcgaa
ctgctggggcggattaaagttgctccgaaacgcattttgcgcctgagcgaagccacgggg
acggggcgttatctgatgatcggtgccgccgagcacgggtttatcgataccctcaacaac
gtggcattaatctgtgaaagcgacctgctgggtgaacgtgttgcgcgtcgccgtcaggac
agccgtcgcaccattaacccggatacgctgatccgcaacctggcggaactccatccgggc
cagccgattgtgcaccttgaacatggcgtgggtcgttatcaggggatgacgacgctggaa
gccggtggcatcaaaggcgaatacctgatgctgacctacgccaacgacgccaaactctac
gtgccggtctcatccctgcatctgatcagtcgctacgccgggggtgcagaagagaatgca
ccattgcataaactgggcggtgacgcctgggcacgcgcccggcagaaagcggcggaaaaa
gtgcgtgatgtggcggccgagctgctggatatctatgcccagcgtgcggccaaagagggc
tttgcctttaagcatgataaagagcagtaccagctgttctgcgacagcttcccgtttgaa
accacgccggaccaggctcaggccatcaatgccgtgttaagcgacatgtgtcagccgctg
gcaatggacaggctggtctgtggcgatgtcggcttcgggaaaaccgaagtagccatgcgc
gcggcgttcctcgccgtcgaaaataacaagcaggtggcggtgctggtacccaccaccctg
ctcgctcagcagcacttcgataacttccgcgaccgctttgccaactggccggtacgcatc
gagatgctgtcacgttttcgcagtaccaaagagcaaacgcaaatcctggagcaggccagc
gagggtaagatcgatattctgatcggcacccacaaactgctgcagagcgacgtgaaatgg
aaagatctggggctgctgattgttgatgaagagcaccgtttcggggtacgccataaagag
cgtattaaagcgatgcgtgccgacgtcgatatcctgaccctgactgcaacgccaatcccg
cgaaccctgaacatggcgatgagcggcatgcgcgatctgtcaattatcgccacgccgccg
gcgcgtcgtctggccgtgaaaacctttgtgcgagagtacgacaatctggtggtgcgtgag
gccattctgcgtgaggtgctgcgcggcggtcaggtctattacctctacaacgacgtggaa
aatatccagaaagcggcagaccggctggcagagctggtgccggaagcgcgtattgccatc
ggccacgggcaaatgcgcgagcgcgagctggaacgggtgatgaacgacttccaccaccag
cgctttaacgtgctggtgtgtacgaccatcattgagaccgggatcgatatcccgacggcc
aacaccatcattattgaacgcgcggatcatttcggtctggcgcagcttcatcagctgcgt
ggccgcgtcgggcgttcgcaccatcaggcctatgcatggctgctgacgccgcatccaaaa
gcgatgaccaccgatgcgcaaaaacgtctggaagcgatcgcctcgctggaagatctgggc
gctggctttgcactggcgacgcacgacctggagatccgcggtgcgggtgagctgttgggt
gaagatcaaagtggctcgatggaaaccatcggtttctcgctctacatggagttgctggaa
aacgcggtcgatgctctcaaggccggacgcgaaccgtcgctggaagatctcaccagccag
caaaccgaagttgagttacgcatgccatctctgctaccggacgatttcattccggatgtg
aacacccgcctgtcgttctacaaacgtatcgccagtgcgaaaaatgagaacgagctggaa
gagatcaaagtcgagcttattgaccgctttggcctgctcccggatgccgcacgcaacttg
ctggatatcgcgcggctgcgtcagcaggcgcagaagctgggcattcgtaagcttgagggc
aatgagaaaggcggcgtgattgagtttgccgagaaaaaccacgttaaccctacgtggctc
atcggtttactgcaaaagcagccgcagcatttccgcctggatgggccaacgcgtctgaaa
tttacgcaggagctgacggagcgtaaaacccgtatggactgggtacgcaactttatgcgc
cagctggaagagaacgcgatcgcataa
DBGET
integrated database retrieval system
