Enterobacter cloacae ECNIH4: ECNIH4_01205
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Entry
ECNIH4_01205 CDS
T03486
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ecln
Enterobacter cloacae ECNIH4
Pathway
ecln03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ecln00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ECNIH4_01205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecln03021
]
ECNIH4_01205
03400 DNA repair and recombination proteins [BR:
ecln03400
]
ECNIH4_01205
Enzymes [BR:
ecln01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ECNIH4_01205
Transcription machinery [BR:
ecln03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ECNIH4_01205
DNA repair and recombination proteins [BR:
ecln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ECNIH4_01205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AIX52934
UniProt:
A0A6S5JLB0
LinkDB
All DBs
Position
247026..251249
Genome browser
AA seq
1407 aa
AA seq
DB search
MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSL
PSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERHQILTEEQYLDALEEFGDEFDAKM
GAEAIQALLKSMDLEQECEQLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY
LRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERIYRAG
LASLHARVKVRITEYEKDANGEFVAHTSLKDTTVGRAILWMIVPKGLPFSIVNQALGKKA
ISKMLNTCYRILGLKPTVIFADQTMYTGFAYAARSGASVGIDDMVIPEKKHEIISEAEAE
VAEIQEQFQSGLVTAGERYNKVIDIWAAANDRVSKAMMDNLQTETVINRDGVEEQQVSFN
SIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTLEGITMTPVIEGGDVKEPLRDRVL
GRVTAEDILKPGTADILVPRNTLLHEQWCDLLEANSVDSVKVRSVVSCDTDFGVCAHCYG
RDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIKL
SNAKSVVNSAGKLVVTSRNTELKLIDEFGRTKESYKVPYGAVMAKGDGEQVAGGETVANW
DPHTMPVITEVSGFIRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTTGGKDLRPALKI
VDAQGNDVLIPGTDMPAQYFLPGKAIVQLEDGVQISSGDTLARIPQESGGTKDITGGLPR
VADLFEARRPKEPAILAEISGIISFGKETKGKRRLVITPVDGSEPYEEMIPKWRQLNVFE
GERVERGDVVSDGPEAPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKINDKHIEVIVRQM
LRKATIENAGSSEFLEGEQVEYSRVKIANRDLEANGKIGATYARDLLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGELPA
APQVTAEDASASLAELLNAGLGGSDNE
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagatttattaaagtttctgaaagcgcagactaaaaccgaagagtttgatgcgatc
aaaattgctctggcttcgccagacatgatccgttcatggtctttcggtgaagttaaaaag
ccggaaaccatcaactaccgtacgttcaagcctgagcgtgacggccttttctgtgcgcgt
attttcgggccagtaaaagactacgagtgcctgtgcggtaagtacaagcgcctgaaacac
cgtggtgtgatctgtgagaagtgtggcgttgaagtgacccagaccaaagtgcgtcgtgag
cgcatgggccacatcgagctggcgtctccgactgcgcacatctggttcctgaaatctctg
ccgtcccgtatcggtctgctgctggatatgccgctgcgtgatatcgaacgcgtactgtac
ttcgaatcttatgtggttatcgaaggcggtatgacgaatctggaacgtcaccagatcctg
actgaagagcagtatctggacgcgctggaagagttcggtgacgaattcgacgcgaaaatg
ggtgcggaagctatccaggccctgctgaagagcatggatctggagcaagagtgcgagcag
ctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaaaaagctgaccaagcgt
atcaaactgctggaagcgttcgttcagtctggtaacaaaccagagtggatgatcctgacc
gttctgccggttctgccgccagatctgcgtccgctggttccactggatggtggtcgtttc
gcgacgtctgacctgaacgatctgtatcgtcgcgtcattaaccgtaacaaccgtctgaaa
cgtctgctggatctggctgcgccggacatcatcgtacgcaacgaaaaacgtatgctgcag
gaagcggtagatgccctgctggataacggtcgtcgcggtcgtgcgatcaccggttctaac
aagcgtcctctgaaatctttggccgatatgatcaaaggtaaacagggtcgtttccgtcag
aacctgctcggtaagcgtgttgactactccggtcgttctgttatcaccgtaggtccatac
ctgcgtctgcatcagtgcggtctgccgaagaaaatggcactggagctgttcaaaccattc
atctacggcaaactggagctgcgtggcctggccaccaccatcaaagccgcgaagaaaatg
gttgagcgtgaagaagctgtcgtttgggatatcctggacgaagtgatccgcgaacacccg
gtactgctgaaccgtgcaccaaccctgcaccgtctgggtatccaggcatttgagccagta
ctgatcgaaggtaaagctatccagctgcacccgctggtttgtgcggcgtataacgccgac
ttcgatggtgaccagatggctgttcacgtaccgctgacgctggaagcccagctggaagcg
cgtgcgctgatgatgtctaccaacaacatcctgtccccagcgaacggtgagccaatcatt
gttccttctcaggacgttgtactgggtctgtactacatgacccgtgactgtgttaacgcc
aaaggcgaaggcatggtgctgactggccctaaagaagctgagcgtatttatcgcgctggc
ctggcctctctgcatgcgcgcgttaaagtgcgtatcactgaatacgaaaaagatgcaaac
ggcgaattcgttgcgcacaccagcctgaaagacacgaccgttggccgtgccattctgtgg
atgatcgtaccgaaaggtctgcctttctccatcgtcaaccaggcgctgggtaagaaagcg
atctccaaaatgctgaacacctgttaccgcattctgggtctgaagccgaccgttatcttc
gctgaccagacaatgtacaccggctttgcttatgcagcgcgttcaggtgcatctgttggt
atcgatgacatggtcatcccagagaagaaacacgagatcatctctgaagcggaagctgaa
gttgctgagatccaggagcagttccagtctggtctggtaaccgcgggcgaacgctataac
aaagttatcgatatctgggctgcggcgaacgatcgtgtatccaaggcgatgatggataac
ctgcagaccgaaaccgtgattaaccgtgacggcgtagaagagcagcaggtttccttcaac
agcatctacatgatggccgactccggtgcgcgtggttctgcagcacagattcgtcagctg
gcaggtatgcgtggtctgatggcgaagccagatggctccatcatcgaaacgccaatcacc
gcgaacttccgtgaaggtctgaacgtactccagtacttcatctccacgcacggtgcgcgt
aaaggtctggcggataccgcactgaaaacagcgaactccggttatctgacgcgtcgtctg
gttgacgttgcacaggatctggtcgtaactgaagacgattgtggcaccctcgaaggtatc
accatgaccccggttatcgagggtggtgatgttaaagagccactgcgcgatcgcgtactg
ggtcgtgtaaccgcggaagacattctgaagccgggtaccgcagacattctggttccacgc
aacacgctgctgcacgaacagtggtgtgacctgctggaagcgaactctgttgactccgtg
aaagtgcgttccgttgtatcctgtgacaccgactttggtgtttgtgcgcactgctatggt
cgtgacctggcgcgtggccacatcatcaacaaaggtgaagctattggcgttatcgcggca
cagtccatcggtgagccaggtacacagctgacgatgcgtacgttccacatcggtggtgcg
gcatctcgtgcggctgctgaatccagcattcaggtgaaaaacaaaggtagcatcaagctc
agcaatgcgaagtcggttgttaactccgcaggcaagctggttgtgacctctcgtaacacc
gagctgaagctgatcgacgaattcggtcgtaccaaagagagctataaagtaccttacggt
gcggttatggcgaaaggtgatggcgagcaggttgccggcggtgaaaccgttgcaaactgg
gatccacacaccatgccggttatcaccgaagtaagtggtttcatccgctttactgacatg
atcgacggccagaccattactcgtcagaccgacgagctgaccggtctgtcttctctggtg
gttctggattctgctgaacgtactaccggtggtaaagatctgcgtcctgcactgaaaatc
gttgatgctcagggtaatgacgttctgatcccgggtaccgatatgcctgcgcagtacttc
ctgccgggtaaagcgattgtacagctggaagatggcgtacagatcagctcaggtgacacc
ctggcgcgtattcctcaggaatccggcggtaccaaggacatcaccggtggtctgccacgc
gttgcggacctgttcgaagcacgtcgtccgaaagagccggcaatcctggctgagatcagc
ggtatcatttccttcggtaaagagaccaaaggtaagcgccgtctggttatcactccagta
gatggcagcgagccgtacgaagagatgattcctaagtggcgtcagctcaacgtgttcgaa
ggtgaacgtgtagaacgtggtgacgttgtttccgacggtccagaagcgccgcacgacatc
ctgcgtctgcgtggtgtacatgctgttacccgttacattgttaacgaagtacaggacgta
taccgcctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatg
ctgcgtaaagcaaccatcgaaaacgcaggcagctctgagttcctcgaaggcgagcaggtt
gaatactcacgcgtcaagatcgctaaccgcgacctggaagcgaatggcaaaatcggtgcg
acttacgcgcgcgatctgctgggtatcaccaaagcgtctctggcaaccgagtccttcatc
tctgcagcatcgttccaggaaacgactcgtgtcctgaccgaagcggctgttgcaggtaaa
cgtgatgaactgcgcggtctgaaagagaacgttatcgtgggtcgtctgatcccagcgggt
accggttatgcataccatcaggatcgtatgcgtcgtcgtgctgcgggcgaactgccagct
gcaccgcaggtgactgctgaagatgcatccgcgagcctggcagaactgctgaacgcaggt
ctgggcggttccgacaacgagtaa
DBGET
integrated database retrieval system
