Enterobacter roggenkampii 35734: LI67_021295
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Entry
LI67_021295 CDS
T04878
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ecls
Enterobacter roggenkampii 35734
Pathway
ecls03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecls00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LI67_021295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecls03019
]
LI67_021295
03016 Transfer RNA biogenesis [BR:
ecls03016
]
LI67_021295
Enzymes [BR:
ecls01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LI67_021295
Messenger RNA biogenesis [BR:
ecls03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LI67_021295
Transfer RNA biogenesis [BR:
ecls03016
]
Prokaryotic type
tRNA degradation factors
LI67_021295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_2
KH_2
aRib
SLS1_KH2
Motif
Other DBs
NCBI-ProteinID:
AKZ75193
UniProt:
A0A0F0S5B5
LinkDB
All DBs
Position
1:complement(4336217..4338355)
Genome browser
AA seq
712 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGKIPGGFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQEELKESKLDLVVA
GTEAAVLMVESEAELLSEDQMLGAVVFGHDQQQVVIQNINDLVKEAGKPRWDWQPEAAND
ALNARVAALAESRLSDAYRITDKQERYAQVDVIKSEVTATLVAEDETLDANEIGEILHAI
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQIIDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPEADK
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA
INAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKFAIRRIEEITAEIEVGRVYAGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRIRLSIKEATEQSQPAAAPEAQAAEQQGE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatccgatcgttcgtaaattccagtatggtcaacataccgtcacgctggaaacc
ggcatgatggcacgtcaggcgactgctgccgttatggtaagcatggatgacaccgcggta
ttcgttaccgttgtgggccagaaaaaagctaaaccaggtcaggacttcttcccgctgacc
gttaactaccaggagcgtacctacgctgccggtaaaatcccgggtggtttcttccgtcgt
gaaggccgtccaagcgaaggcgaaaccctgatcgcgcgtctgattgaccgcccggttcgc
ccgctgttcccggaaggcttcgtcaacgaagtgcaggttatcgcgaccgttgtttccgtt
aacccacaggttaacccggacatcgtggcgatgatcggtgcgtccgcagccctgtcactg
tctggtattccattcaatggcccaatcggtgccgcgcgcgtcggttacatcaacgaccag
tacgtgctgaacccaactcaggaagagctgaaagaaagtaagctggacctggtggttgcg
ggtactgaagccgctgtgctgatggttgaatccgaagctgaactgctgagcgaagaccag
atgctgggcgctgtggtcttcggccatgaccagcagcaggttgttatccagaacatcaac
gacctggtgaaagaagccggtaaaccacgttgggactggcagccagaagcggccaacgac
gcgctgaacgcacgcgttgcagctctggcagaatctcgtctgagcgatgcataccgcatc
accgacaaacaggagcgttacgctcaggttgatgtgatcaaatctgaagtaaccgcgacc
ctggttgccgaagacgaaacgctggacgctaacgaaattggcgaaatcctgcacgctatc
gagaaaaacgttgttcgtagccgcgtgctggctggcgagccgcgtatcgatggccgtgaa
aaagacatgatccgtggtctggatgtgcgtactggcgtgctgccacgtactcacggttct
gcgctgttcacccgtggtgaaacgcaggcgctggttaccgcgaccctgggtacagcccgt
gacgcgcagatcatcgacgaactgatgggcgagcgcactgacagcttcctgttccactac
aacttccctccgtactccgtcggtgaaaccggcatggttggttcaccgaagcgtcgtgaa
attggtcacggtcgtctggcgaagcgcggcgtgctggcagtgatgccagaagcagacaaa
ttcccgtacaccgtacgtgtggtgtctgaaatcaccgaatccaacggttcttcttccatg
gcttccgtgtgtggtgcctctctggcgctgatggatgcaggcgtgccaatcaaagccgcc
gttgcgggtatcgcaatgggcctggtgaaagaaggcgacaactatgttgttctgtctgac
attctgggcgacgaagaccacctgggcgatatggacttcaaagtagcgggttcccgcgac
ggtatctctgcgctgcagatggatatcaaaattgaaggtatcaccaaagagatcatgcag
gttgcgctgaaccaggctaagggtgcacgtctgcacatcctgggcgtgatggaacaggct
atcaacgcgccacgcggtgatatctctgaattcgcaccgcgtattcacaccatcaagatc
aatccagacaagatcaaagatgttatcggtaagggcggttccgtaatccgtgcgctgacc
gaagagactggcaccaccatcgaaatcgaagatgacggtactgtgaagatcgcagctacc
gacggcgagaaagcgaaattcgcgatccgtcgcatcgaagaaatcactgcagaaatcgaa
gtgggccgcgtgtatgcaggtaaagtgacccgtatcgttgactttggcgcgttcgttgcc
atcggcggcggtaaagaaggtctggttcacatctctcagatcgctgacaagcgcgttgag
aaagtgaccgattacctgcagatgggtcaggaagtgccggttaaagttctggaagtcgat
cgccagggccgtatccgtctgagcattaaagaagcaaccgagcagtctcagccagctgct
gcgccagaagcacaggcagcagaacagcaaggcgagtaa
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