Escherichia coli SMS-3-5 (environmental): EcSMS35_0369
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Entry
EcSMS35_0369 CDS
T00672
Symbol
cynR
Name
(GenBank) transcriptional regulator cynR
KO
K11921
LysR family transcriptional regulator, cyn operon transcriptional activator
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecm03000
]
EcSMS35_0369 (cynR)
Transcription factors [BR:
ecm03000
]
Prokaryotic type
Helix-turn-helix
LysR family
EcSMS35_0369 (cynR)
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
PBP_like_2
HTH_5
P22_Cro
Motif
Other DBs
NCBI-ProteinID:
ACB19840
UniProt:
B1LIM3
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Position
complement(382023..382922)
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AA seq
299 aa
AA seq
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MLSRHINYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLGVPLFDRSGRTIRLTDA
GEVWRQYASRALQELGAGKRAIHDVADLTRGSLRIAVTPTFTSYFIGPLMADFYARYPGI
TLQLQEMSQEKIEDLLCRDELDVGIAFAPAHSPELEAIPLLTESLALVVAQHHPLAACEQ
VALSRLHDEKLVLLSAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELIRRTSLSTLL
PAAIATQHDGLKAISLAPPLLERTAVLLRRKNSWQTAAAKAFLHMALDKCAVVGGNESR
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgctctctcgacatatcaattattttcttgccgtggctgaacatggcagctttacccgt
gccgccagtgcgttgcacgtctcccagcctgcgctttcccagcagattcgccagttagag
gagagtttaggcgtgccgctgtttgaccgtagcgggcgaacgattcgtctcactgatgcg
ggagaagtctggcgacagtacgccagccgggcgttacaggaactgggggcgggtaaacgg
gcgattcatgatgttgccgatctgacgcgaggatcgctgcgtatcgccgtcactcccacc
tttacaagctactttatcggccctttaatggcggatttctatgcgcgctaccccggcatc
acgctccagctacaggaaatgtcgcaggagaaaatcgaagatctgctttgtcgcgacgag
ctggacgttgggattgccttcgcgcctgcgcattcgccggagctggaggcaattccttta
ctgacagaaagtttagcgttagtcgtggcgcaacatcatccgctggctgcctgtgaacag
gtggcgttgagtcgcttgcatgatgaaaaactggtcctgctcagcgcggaatttgccacc
agagagcaaattgaccactactgcgagaaagcggggctacatccacaggtggtcattgag
gcgaactcaattagcgcggttctggagctgattcgccgcacttccctttccacattgttg
ccagcagcgattgccacacaacatgacgggcttaaagcgatttctcttgccccaccgtta
ctggagagaacggcggttttgttgcggcggaaaaatagctggcagacagccgccgcgaag
gcatttttacacatggcgttggataaatgcgcggttgttggcggaaatgaatcgcggtaa
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