Escherichia coli K-12 MG1655: b0338
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Entry
b0338 CDS
T00007
Symbol
cynR
Name
(RefSeq) DNA-binding transcriptional dual regulator CynR
KO
K11921
LysR family transcriptional regulator, cyn operon transcriptional activator
Organism
eco
Escherichia coli K-12 MG1655
Brite
KEGG Orthology (KO) [BR:
eco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eco03000
]
b0338 (cynR)
Transcription factors [BR:
eco03000
]
Prokaryotic type
Helix-turn-helix
LysR family
b0338 (cynR)
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
PBP_like_2
HTH_5
P22_Cro
Motif
Other DBs
NCBI-GeneID:
945001
NCBI-ProteinID:
NP_414872
RegulonDB:
ECK120001385
ECOCYC:
EG11421
ASAP:
ABE-0001165
UniProt:
P27111
Structure
PDB
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Position
complement(357791..358690)
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AA seq
299 aa
AA seq
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MLSRHINYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLGVPLFDRSGRTIRLTDA
GEVWRQYASRALQELGAGKRAIHDVADLTRGSLRIAVTPTFTSYFIGPLMADFYARYPSI
TLQLQEMSQEKIEDMLCRDELDVGIAFAPVHSPELEAIPLLTESLALVVAQHHPLAVHEQ
VALSRLHDEKLVLLSAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELIRRTSLSTLL
PAAIATQHDGLKAISLAPPLLERTAVLLRRKNSWQTAAAKAFLHMALDKCAVVGGNESR
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgctctctcgacatatcaattattttcttgccgtggctgaacatggcagcttcacccgt
gccgccagtgcgttgcacgtctcccaacctgcgctttcccagcagattcgccagttagag
gagagtttaggcgtgccgctgtttgaccgtagcgggcgaacgattcgtctcactgatgca
ggagaagtctggcgacagtacgccagccgggcgttacaggaactgggggcgggtaaacgg
gcgattcatgatgttgccgatctgacgcgaggatcgctgcgtatcgccgtcacccccacc
tttacgagctactttatcggccccttaatggcggatttctatgcgcgctatcccagcatc
acgctccagctacaggaaatgtcgcaggagaaaatcgaggatatgctttgccgcgacgag
ttggacgttgggattgccttcgcgcctgtgcattcgccggagctggaggcaattccttta
ctgacagaaagtttagcgttagtcgtggcgcaacatcatccgctggccgtccatgaacag
gtggcgttgagtcgcttgcatgatgaaaaactggtcctgctcagcgcggaatttgccacc
agagagcaaattgaccactactgcgagaaagcggggctacatccacaggtggtcattgag
gcgaactcaattagcgcggttctggagctgattcgccgcacttccctttccacattgtta
ccagcagcgattgccacacaacatgacgggcttaaagctatttctcttgccccgccacta
ctggagagaacggcggttttgttgcggcggaaaaatagctggcagacagccgccgcgaag
gcatttttgcacatggcgttggataaatgcgcggttgttggcggaaatgaatcacggtag
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