Escherichia coli APEC O78 (APEC): APECO78_17135
Help
Entry
APECO78_17135 CDS
T02445
Name
(GenBank) DNA-binding transcriptional repressor
KO
K03487
LacI family transcriptional regulator, asc operon repressor
Organism
ecoa
Escherichia coli APEC O78 (APEC)
Brite
KEGG Orthology (KO) [BR:
ecoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecoa03000
]
APECO78_17135
Transcription factors [BR:
ecoa03000
]
Prokaryotic type
Helix-turn-helix
LacI family
APECO78_17135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
HTH_38
TetR_N
HTH_31
HTH_Tnp_ISL3
HTH_IclR
Xre-like-HTH
HTH_7
Motif
Other DBs
NCBI-ProteinID:
AGC88148
LinkDB
All DBs
Position
complement(3568720..3569733)
Genome browser
AA seq
337 aa
AA seq
DB search
MMTTMLEVAKRAGVSKATVSRVLSGNGYVSQETKDRVFQAVEESGYRPNLLARNLSAKST
QTLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLADGKHSAEEERQAIQYLLDLRCD
AIMIYPRFLSVDEIDDIIDAHSQPIMVLNRRLRKNSSHSVWCDHKQTSFNAVAELINAGH
QEIAFLTGSMDSPTSIERLAGYKDALAQHGIALNEKLIANGKWTPASGAEGVEMLLERGA
KFSALVASNDDMAIGAMKALHERGVAVPEQVSVIGFDDIAIAPYTVPALSSVKIPVTEMI
QEIIGRLIFMLDGGDFSPPKTFSGKLIRRDSLIALSR
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgacgatgctggaagtggcgaagcgcgccggggtttcaaaagcgaccgtttcc
cgcgtgctttcaggtaatggctacgtcagccaggagactaaagatcgcgtgtttcaggcg
gtagaagagagcggttaccgcccaaatttgctggcccgcaatctgtcggcgaagagtact
cagacgctggggctggtagtgaccaacacgctttatcacggcatttattttagtgaatta
ctgtttcatgccgcgcgaatggcggaagagaaagggcgacagttgctattggcagatggt
aaacacagcgccgaagaagagcgccaggcgattcagtatctgctggatttgcgctgcgac
gccattatgatttacccgcgttttttaagcgtggatgagattgatgacatcattgacgcg
cacagtcagccgataatggtgcttaatcgccgcctgcgcaaaaatagcagccatagcgtc
tggtgcgatcataaacagaccagctttaacgccgtggcagagttgataaacgccgggcat
caggagattgctttccttaccggctcgatggattcccccaccagcattgaacgtcttgcc
gggtataaagacgcgctggcgcagcatggtattgcgctcaatgaaaaacttatcgctaac
ggtaaatggacgcctgccagcggggccgaaggggtagaaatgttgctcgaacgtggggct
aaatttagcgcgttagttgccagtaacgacgatatggcgataggtgcgatgaaagcgtta
cacgagcgcggcgtagcggtgccagagcaggtgtcagttatcggattcgatgatatcgct
attgccccctacaccgttccggcgctctccagcgtaaaaattccggtgactgagatgatt
caggaaattattggacggctgatttttatgctcgatggcggggatttctcaccgccgaaa
accttcagcggaaaactgatccgccgcgactcactcattgctctttcgcgataa
DBGET
integrated database retrieval system
