Escherichia coli APEC O78 (APEC): APECO78_21365
Help
Entry
APECO78_21365 CDS
T02445
Name
(GenBank) DNA-binding transcriptional activator GadW
KO
K21906
AraC family transcriptional regulator, glutamate-dependent acid resistance regulator
Organism
ecoa
Escherichia coli APEC O78 (APEC)
Brite
KEGG Orthology (KO) [BR:
ecoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecoa03000
]
APECO78_21365
Transcription factors [BR:
ecoa03000
]
Prokaryotic type
Helix-turn-helix
AraC family
APECO78_21365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
AGC88990
LinkDB
All DBs
Position
complement(4418934..4419662)
Genome browser
AA seq
242 aa
AA seq
DB search
MTHVCSVILIRRSFDIYHEQHKISLHNESIVLLEKNLADDFAFCSPDTRRLDIDELTVCH
YLQNIRQLPRNLGLHSKDRLLINQSPPMPLVTAIFDSFNESGVNSPILSNMLYLSCLSMF
SHKKELIPLLFNSISTVSGKVERLISFDIAKRWYLRDIAERMYTSESLIKKKLQDENTCF
SKILLASRMSMARRLLELRQIPLHTIAEKCGYSSTSYFINTFRQYYGVTPHQFAQHSPGT
FS
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgactcatgtctgctcggtgatcctcattcgtcgttcattcgatatttatcatgaacag
cataaaatatcgctgcataacgagagtatcgtgctgctggagaaaaatttggcagacgat
tttgcgttttgttcaccggatacgcgacgactggatatcgatgagctgacagtttgccat
tacttacaaaatattcgtcagctaccacgcaatttagggttacatagcaaagaccgtcta
ttaattaaccagtcaccccccatgccgctggtgacggcgatttttgatagcttcaatgaa
tccggggtaaattcaccgatactgagcaatatgctctacctttcctgtttatcgatgttt
tctcataagaaagaactgatccccttacttttcaatagcatcagcactgtttcaggaaaa
gttgaacgccttattagctttgatatcgccaaacgttggtatctgcgcgatatcgcggaa
agaatgtataccagcgagagtctcatcaaaaaaaagttgcaggatgaaaatacctgtttc
agtaaaatattactcgcttccaggatgtcgatggccagacgattactcgagttacgtcaa
attcctctgcatactattgcagaaaaatgtggctatagcagtacgtcgtactttataaac
acatttcgacaatattatggtgtaacgccacatcagtttgcgcaacattcgccaggtacc
ttttcctga
DBGET
integrated database retrieval system