Paremcibacter congregatus: FIV45_00985
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Entry
FIV45_00985 CDS
T06024
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ecog
Paremcibacter congregatus
Brite
KEGG Orthology (KO) [BR:
ecog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecog03400
]
FIV45_00985 (addB)
Enzymes [BR:
ecog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FIV45_00985 (addB)
DNA repair and recombination proteins [BR:
ecog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
FIV45_00985 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QDE25954
LinkDB
All DBs
Position
212059..215127
Genome browser
AA seq
1022 aa
AA seq
DB search
MPRRLKKAPELYNLPAHTSFVDGLVAGIRARFGDDPLTLSDVLILLPNRRAVRSLRDAFL
RQAGGKSLLLPRIEPIGDVDEDDLFLSGNLPQATWDSALAPAISPFTRQMLLMDIIARWY
RRRQAVTGEPVPEVAQCAILAQALGQFLDQVQTEQLTFRDLENLVPEEYAGHWQQTLEFL
KILTEHWPDILGPTGFSDVAARRNILLEGLREKWLENPPAHPIIAAGSTGSIPATAGLLE
VVARLPQGIVLLPGLDAEMDAASWDVLDDTHPQATMKHLLEAIGANRDEVRPWLDQTPSA
AKLARHRLLQEVMRPAETTDQWRTLTLDITAATEGFLRLDAPGQREEAGMIALMLREVLE
TDGKTAALVTPDRQLARRVAGEMQRWDILIDDSAGTPLFNTAAGLYLRLTAEMVGDGLAP
VGLLSVLKHPLSAGGEVVGDFRQKVRLLESHILRGPRPGAGTGGIARAIASALAVQKKAS
KERVVAELMALAEWWAGLAGVIAPFEQMMARPDASFEDLLIAHIEMAEGLAASHDRTGAE
RVWRGDAGEAAAQLIEDLHLAAPHLPSLACETYPSLLEVFMGGVTVRPKYGQHPRLNIWG
PLEARLQQADLVILAGLNEGSWPPEPAPDPWMSRPMRRAFGLPSLEQKIGLSAHDFIQAA
SAPQVVISRAEKVDGTPTVKSRWLSRLDAIAADADFAIPKATTTAQWLDWYRALDKPEQV
RSIAPPRPTPPLTARPRSLSVTRIQKWMQDPYSIYAHYILGLRVLDPLDADPGAADKGTI
IHDALDAFLKQYPDHLPDDAVDRLAEIGREKFDAYLDRPTVRAFWWPRFLQVADWFVAEE
RIRRATSATVATEISGEKIFSLPGGDFTLTAKADRIDRLGDGTYSIIDYKTGASPTVRQI
YAGYAPQLPLEGLMVEGGNFSGIAAGGVVSDLSYWQLKGGEEVAKISSFNMNVRAKVDVG
EVIKASYDGLVRLVTTFDLEATPYLNNPRPDNLGYGEYDHLARTREWRGNDLEQDEEGEV
TL
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtcgtctgaaaaaagcgcctgagctttataacctgcccgcccatacctccttt
gtcgatggactggtggcgggaatccgggcgcggtttggcgacgatcccttgacccttagt
gatgtgctgatcctgctgcccaaccgtcgggcggtgcgctccctgcgcgacgccttcctg
cgtcaggccgggggcaagtctctgctgttgccgcgcatcgagccgatcggcgatgtggat
gaggatgacctgtttctgtcgggcaatctgcctcaggccacctgggacagcgccctcgcc
ccggcgatttcgccttttacgcgccagatgctgctgatggacatcatcgcccgctggtac
cggcggcggcaggcggtgacgggagagcccgtgccggaggtggcgcaatgcgcgatcctg
gcgcaggctctgggtcagttcctcgatcaggtccagaccgagcagctgacctttcgcgat
ctggaaaatctggtgccggaggaatatgccgggcattggcaacagaccctggaatttctc
aagatcctcaccgaacattggccggatattctgggcccgaccggtttttccgacgtggcg
gcccggcgtaatattctgctggagggcttgcgggaaaaatggctcgaaaatccgcccgct
catccgatcatcgccgccggctccaccggctcgatcccggcgacggcgggcctgctcgaa
gtggtggcgcgtctgccccagggcattgtgctgctgccggggctggacgcggaaatggat
gcggcgagctgggacgtgctggacgatacccacccgcaggcgaccatgaagcatctgctg
gaggcgatcggcgccaaccgcgacgaggtgcggccgtggctcgaccagacgccgtcggcg
gcaaagctcgcccgccacagattgctgcaggaggtaatgcgtccggcggaaaccaccgac
cagtggcgcacactcacgcttgatatcaccgccgcgaccgagggcttcctgcgcctggac
gcgccggggcagcgggaagaggcgggcatgatcgccctgatgctgcgcgaggtgttggaa
accgacggcaagaccgcggcgctggttaccccggaccggcagctggcgcgccgggtcgcg
ggcgagatgcagcgctgggacattctgattgatgacagtgcgggcacgcctttgttcaat
accgccgccgggctttatctgcggctgacggccgagatggtcggcgacggtcttgcgccg
gtggggttgctgtcggtgttgaagcatccgctaagtgcgggcggtgaggtggtcggcgat
tttcgccagaaagtccgcctgctggaaagccatattctgcgcgggccgcgccccggggcg
ggcacaggcggcattgcccgggcaatcgcatcggcgctggcggttcagaaaaaagcctct
aaagagcgcgttgtggcggaactgatggcgctcgctgagtggtgggccggtctcgccggg
gtcatcgccccctttgaacagatgatggccaggcccgacgcttccttcgaggatctgctg
atcgctcatatcgagatggcggaggggctggcggcctcgcacgatcggaccggggccgag
cgggtgtggcgcggtgacgcgggggaggcggcggcgcaactgattgaagacctgcatctg
gcggcgccgcatctgccgagcctcgcgtgtgagacctacccgtcgttgctcgaggtcttt
atgggcggggtgacggtgcggccgaaatatggccagcacccccggctcaatatctggggc
ccgctggaggcgcggctgcaacaggcggatctggtgatcctcgccggcctgaatgaaggc
agctggccgccggaaccggccccggacccctggatgagccgcccgatgcgccgggcgttc
ggtctgccgtccctcgaacagaaaatcggtctcagcgcccatgatttcattcaggcggcc
tccgcgccccaggtggtgatcagccgggcggagaaggtcgatggcaccccgacggtgaaa
tcccgctggctcagccgtcttgacgccattgccgccgacgcagatttcgcgatccccaag
gcgacgacgaccgcccagtggctcgactggtaccgggcgttggacaagccggaacaagtg
cgctcgatcgcgccgccgcgtccgacgccaccgcttaccgcccggccccgcagcctgtcg
gtgacgcgcattcagaaatggatgcaggacccctatagtatttacgcgcactatatcctc
gggctccgtgtgcttgatccgctggatgcggacccaggggcggcggataaaggcaccatc
atccatgatgcgctcgatgctttcctgaaacaatatcccgatcatctgcctgacgacgca
gtggacaggctggcggagatcgggcgggagaaattcgacgcctatcttgaccggccaacg
gtgcgcgccttctggtggccgcgtttcctgcaggtcgccgactggtttgtcgcagaggaa
cgcatccggcgtgcgacatccgccaccgtggcgacggaaatttccggtgaaaagatcttc
agcctgccgggtggcgacttcaccctgaccgccaaggccgaccgcatcgaccggctgggc
gacggcacatacagcatcatcgattataaaaccggcgccagccctacggtgcggcagatt
tacgccggttacgcgccgcaattgcccctcgagggcctgatggttgagggcggaaacttc
tctggcatcgcggccggcggcgtggtcagcgatctgtcctactggcagcttaaaggcggg
gaagaggtggcgaaaatcagcagcttcaatatgaacgtgcgggccaaggttgatgtgggc
gaggtgatcaaggcgtcttacgacgggctggtcaggctggtgaccaccttcgatctggag
gcgaccccttacctcaacaacccgcgcccggataatctcggttacggcgaatatgaccat
ctggcccgcacccgcgaatggcggggcaatgatctcgagcaggatgaggaaggggaggtg
acgttatga
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integrated database retrieval system
