Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_4303
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Entry
ECRM13516_4303 CDS
T03011
Symbol
gadW
Name
(GenBank) HTH-type transcriptional regulator gadW
KO
K21906
AraC family transcriptional regulator, glutamate-dependent acid resistance regulator
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecoh03000
]
ECRM13516_4303 (gadW)
Transcription factors [BR:
ecoh03000
]
Prokaryotic type
Helix-turn-helix
AraC family
ECRM13516_4303 (gadW)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
AHG16921
LinkDB
All DBs
Position
complement(4243562..4244290)
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AA seq
242 aa
AA seq
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MTHVCSVILIRRSFDIYHEQQKISLHNESILLLDKNLADDFAFCSPDTRRLDIDELTVCH
YLQNIRQLPRNLGLHSKDRLLINQSPPMPLVTAIFDSFNDSGVNSPILSKMLYLSCLSMF
SHKKELIPLLFNSISTVSGKVERLISFDIAKRWYLRDIAERMYTSESLIKKKLQDENTCF
SKILLASRMSMARRLLELRQIPLHTIAEKCGYSSTSYFINTFRQYYGVTPHQFAQHSPGT
FS
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgactcatgtctgctcggtgatcctcattcgtcgttcattcgatatttatcatgaacag
caaaaaatatcgctgcataacgagagtatcctgctgctggataaaaatttggcagacgat
tttgcgttttgttcaccggatacgcgacggctggatatcgatgagctgacagtttgccat
tacttacaaaatattcgtcagctaccacgcaatttagggttacatagcaaagaccgtctg
ttaattaaccagtcaccccccatgccgctggtgacggcgatttttgatagtttcaatgac
tccggggtaaattcgccgatactgagcaaaatgctctatctttcctgtttatcgatgttt
tctcataagaaagaactgatccccttacttttcaatagcatcagtactgtttcaggaaaa
gttgaacgccttattagctttgatatcgctaaacgttggtatctgcgcgatatcgcggaa
agaatgtataccagcgagagtctaatcaaaaaaaagttgcaggatgaaaatacctgtttc
agtaaaatattactcgcctccaggatgtcgatggccagacgattactcgagttacgtcaa
attcctctgcatactattgcggaaaaatgtggctatagcagtacatcgtactttataaac
acatttcgacaatattatggtgtaacgccacatcagtttgcgcaacattcgccaggtacc
ttttcctga
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