Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_5379
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Entry
ECRM13516_5379 CDS
T03011
Name
(GenBank) Putative DNA packaging protein
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
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Gene cluster
GFIT
Motif
Pfam:
GpA_nuclease
GpA_ATPase
Motif
Other DBs
NCBI-ProteinID:
AHG17957
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Position
5339849..5341951
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AA seq
700 aa
AA seq
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MLNQETAKAARTDSGYILRAPRRMRVADAVAQYMRVPMGAGNSVPWDPLVAPYVIEPMNC
LASREYDAVIFVGPARTGKTIGLIDGWVIYNVICDPADMLIIQMTEEKAREHSKKRLART
FRVSPEVVSRLSPNKNDNNVYDRTFLAGNYLKIGWPSVNIMSSSDYKCVALTDYDRFPED
IDGEGDAFSLASKRTTTFMSSGMTLVESSPGRDVKDVKWRRTSPHEAPPTTGILSLYNRG
DRRRWYWPCPHCGEYFQPCGDVVAGFRDIADPVLASEAAYIQCPSCSGRIMPEQKRELNG
RGVWLRDGESINADGSRYGDPRRSRIASFWMEGPAAAYQTLSQLVYKLLAAEQEYETTGS
EETLKTVINTDWGLPYLPRASMEQRKSELLEQRAEPVPSRSVPDGVNFLVATVDVQAGRH
RRFVVQVTGYGSRGERWIIDRYNITQSLRGDSDGESQRIDPASYPEDWDVLLTDVFHKSW
PLASDPSQQMRLMAMAVDSGGEDGVTDNAYKFWRRCRRDGLGKRIYLFKGDSIRRAKLIT
RTFPDNTGRTGRRAQAAGDVPLWLLQTDALKDRVNNALWRDSPGPGYVHFPDWLGSWFYD
ELTYEERSSDGKWSKPGRGANEAFDLMVYAEALVILHGYEKIRWPDAPEWASRETWLECV
PDSTEPSPTPEPVSTPVKKQKRKKTVTDDVNPWLTSGGWL
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatcaggaaaccgcaaaggcagcacgaaccgattcaggttatatccttcgcgca
ccgagacgaatgcgggttgctgatgccgttgctcagtatatgcgggtgcccatgggggcc
gggaactcagtcccgtgggatccgctggtggcaccgtatgttattgagccgatgaactgc
ctggcctcgcgtgaatacgacgcagtgatatttgttggcccggcacgaactggcaagact
atcggcctgattgacggctgggtgatttacaacgtgatttgcgatcctgctgatatgctg
atcattcagatgacggaggaaaaagcccgcgaacactccaaaaaacgacttgccagaacg
tttcgcgtcagcccggaagtggtcagtcgcctgagtccgaacaaaaatgacaacaacgtt
tatgacagaacattccttgctggcaactacctgaaaatcggctggccgtcagtcaatatc
atgtcctcatcagattataaatgcgtggcgctgacggattatgaccgttttccggaagat
attgatggcgagggggatgccttctctcttgcctcaaaacgtaccaccacatttatgtcc
agtggtatgacgctggtggagagttcccccggcagggatgtgaaggatgtgaaatggcga
cggacttcaccgcatgaggctccaccaaccacggggatactgtcgctctataaccgtggc
gatcgccgtcgctggtactggccctgtccacactgtggtgagtattttcagccctgcggc
gatgtggttgctggtttccgtgatattgccgatcccgtgctggcaagtgaggcggcttat
attcagtgtccttcctgttcaggacggattatgcctgaacaaaaacgtgagctgaacgga
cgtggggtctggttgcgggatggtgaatccatcaatgcggatggcagtcgttatggtgat
ccccgacgctcacgtattgcgtcattctggatggagggtccggcagctgcttaccagaca
ctctcgcaactcgtttacaaactgcttgctgcagaacaggaatacgagacaaccggaagt
gaagaaacactcaagacggttatcaataccgactggggattaccttatcttccccgtgcc
agcatggagcaacgaaaaagtgaactgcttgagcagcgggcagagccagttccttcccgc
agtgtgccggatggcgttaatttcctggtggcgacagttgatgtgcaggcgggacgtcat
cgccgttttgtggttcaggtaacgggctatggcagccgtggcgaacgctggattattgat
cgttacaacatcacgcagtcattgcgcggtgacagcgacggggagagccagcgaattgat
ccggccagctatccggaagactgggatgtcctgctgacggatgtttttcataaaagctgg
ccgctggcctccgatccttctcaacaaatgcgactgatggcaatggcggtggactccggc
ggtgaagacggagtcactgataatgcctataaattctggcgtcgttgccgtcgtgatggc
cttggtaaacgtatttacctgtttaagggcgacagcatccggcgcgcaaaactgatcacc
cgtacattccctgataacaccggacgaacgggccgacgggcgcaggccgcaggtgatgta
ccgctctggcttcttcagacggatgccctgaaagaccgggtgaataacgcgttatggcgt
gactcgccaggtcccggctatgtgcatttccctgactggctggggagctggttttacgac
gaactgacgtatgaagagcggagcagtgacgggaaatggagtaagccgggtcgcggtgcc
aacgaagcttttgacctgatggtgtatgccgaggctctggtcattctgcatggatacgaa
aagatccgctggccggatgcaccggagtgggcgagccgggaaacctggctggagtgtgtc
ccggacagtaccgaaccgtcacccacaccggaaccggtatccacgcctgttaaaaaacaa
aaacggaagaaaacagtaactgacgatgttaacccctggctgacttccggaggatggtta
tga
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