KEGG   Escherichia coli O18 K1 PMV-1 (ExPEC): ECOPMV1_00473
Entry
ECOPMV1_00473     CDS       T02847                                 
Symbol
ybaQ
Name
(GenBank) putative HTH-type transcriptional regulator ybaQ
  KO
K21498  antitoxin HigA-1
Organism
ecoi  Escherichia coli O18:K1 PMV-1 (ExPEC)
Brite
KEGG Orthology (KO) [BR:ecoi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ecoi02048]
    ECOPMV1_00473 (ybaQ)
Prokaryotic defense system [BR:ecoi02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HigB-HigA
    ECOPMV1_00473 (ybaQ)
SSDB
Motif
Pfam: HTH_3 HTH_19 HTH_17 HTH_30 HTH_26 Sigma54_DBD HTH_31 UPF0122 YdaS_toxin LacI
Other DBs
NCBI-ProteinID: CDH63988
LinkDB
Position
512871..513212
AA seq 113 aa
MKQATRKPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVSALINNNRKLTTEMAFRLA
KVFDTTVDFWLNLQAAVDLWEVENNMRTQEELGRIETVAEYLARREERAKKVA
NT seq 342 nt   +upstreamnt  +downstreamnt
atgaaacaggcaacaagaaaaccgacgacacccggagatattcttctctatgaatatctg
gaaccgctcgatttgaaaatcaatgagttagcagagttgctgcatgttcatcgtaatagc
gtcagtgcactgatcaataacaatcgtaaactcaccactgagatggcattccgtctggcg
aaagtttttgataccacagtcgatttttggctaaacctccaggcggcagttgatctttgg
gaagttgaaaacaacatgcgtacccaggaagaattgggacggattgaaacagtggctgaa
tatttggcacgccgtgaagagcgtgcaaaaaaggtcgcgtag

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