Escherichia coli O18 K1 PMV-1 (ExPEC): ECOPMV1_04402
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Entry
ECOPMV1_04402 CDS
T02847
Symbol
rluF
Name
(GenBank) Ribosomal large subunit pseudouridine synthase F
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
ecoi
Escherichia coli O18:K1 PMV-1 (ExPEC)
Brite
KEGG Orthology (KO) [BR:
ecoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecoi03009
]
ECOPMV1_04402 (rluF)
Enzymes [BR:
ecoi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
ECOPMV1_04402 (rluF)
Ribosome biogenesis [BR:
ecoi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ECOPMV1_04402 (rluF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
CDH67698
LinkDB
All DBs
Position
4515106..4515978
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AA seq
290 aa
AA seq
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MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE
PRESEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG
DLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT
LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS
SEAKPKAKAKPKTVGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccgactcatcagtccgtttaaataaatacatcagcgaaagcggaatttgctca
cgccgcgaagcggatcgctatatcgagcaaggcaatgtgttccttaatggcaagcgagcc
accattggcgatcaggtgaaacccggcgacgttgtgaaagtaaatggtcagttgattgag
cctcgggaatccgaagatttggtacttatcgccctgaacaagcccgtcggtattgtcagc
accaccgaagatggcgagcgcgataacattgtcgatttcgttaaccacagcaaacgcgtg
ttcccgattggccgcctggataaagattcccaggggctgattttcctcaccaatcacggc
gatctggtgaataagatcctccgtgcgggtaacgatcatgagaaagagtatctggtgacg
gttgataaaccgattaccgatgaatttattcgtggtatgggggcgggagtaccgatcctc
gggacggtaactaaaaagtgcaaagtcaaaaaagaagcaccgtttgtcttccgcattacc
ctggtgcaggggctgaaccgtcagattcgtcgcatgtgcgagcactttggttacgaagtg
aaaaagctggaacgtacgcgcattatgaacgtcagcttaagcggcattccgctgggtgag
tggcgcgatttaaccgacgatgagttaatcgatctctttaagctcattgaaaattcctct
tccgaggcaaaacctaaagcgaaggccaaaccgaaaacggtaggcatcaaacgtccagtc
gttaagatggaaaaaacggcggaaaaaggcggtcgcccggcgtccaacggtaagcgtttt
acctcgccggggcgcaaaaagaaggggcgttaa
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