Escherichia coli K-12 MDS42: ECMDS42_2670
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Entry
ECMDS42_2670 CDS
T02541
Symbol
rpoN
Name
(GenBank) RNA polymerase, sigma 54 (sigma N) factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
ecok
Escherichia coli K-12 MDS42
Pathway
ecok02020
Two-component system
ecok02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ecok00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ECMDS42_2670 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ECMDS42_2670 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecok03021
]
ECMDS42_2670 (rpoN)
Transcription machinery [BR:
ecok03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ECMDS42_2670 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
BAL39846
LinkDB
All DBs
Position
2818050..2819483
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AA seq
477 aa
AA seq
DB search
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESNPLLEQIDTHEEIDTRE
TQDSETLDTADALEQKEMPEELPLDASWDTIYTAGTPSGTSGDYIDDELPVYQGETTQTL
QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVPLEDILESIGDEEIDIDEVEAVLK
RIQRFDPVGVAAKDLRDCLLIQLSQFDKTTPWLEEARLIISDHLDLLANHDFRTLMRVTR
LKEDVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDVLVRKHNGHWTVELNSDSIPRLQIN
QHYASMCNNARNDGDSQFIRSNLQDAKWLIKSLESRNDTLLRVSRCIVEQQQAFFEQGEE
YMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI
RALVKKLIAAENPAKPLSDSKLTSLLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaactcaggcttagccaacaactggcgatgacgccacagctccaa
caggcaattcgtctgttgcagttgtcgacgctggaacttcagcaggagctacagcaggcg
ctggagagtaatccgctgcttgagcaaatcgacactcatgaagaaatcgacacccgcgaa
acgcaagacagtgaaacgctggacaccgccgacgcgctcgaacaaaaagagatgccggaa
gagctgccgctcgatgccagttgggacaccatttacaccgctggtacaccatccggcacc
agcggtgactacattgacgacgagctgccggtctaccagggcgaaacgacgcagaccttg
caggattacctgatgtggcaggttgagctgacaccgttttccgacactgaccgcgctatt
gctacctctatcgtcgatgccgttgatgaaaccggttatctgactgtcccgctggaagat
attctcgaaagtataggcgatgaagagatcgacatcgacgaagttgaagccgtccttaag
cggatccaacggtttgatccggtcggtgtggcggcaaaagatctgcgtgactgtctgctg
atccaactctcccaattcgataagaccacgccgtggctggaagaggccagactgatcatt
agcgatcatctcgatctgttagccaatcacgacttccgcactttaatgcgcgtcacgcgt
ctgaaagaagatgtgctgaaagaagccgtcaatctgatccagtcgctcgatccgcgcccc
gggcagtcgatccagactggcgaacctgagtatgtcattccagatgtgctggtgcgtaag
cataacggtcactggacggtagaactcaacagtgacagcattccgcgtctgcaaatcaac
cagcactacgcctcgatgtgcaataacgcgcgcaacgatggtgacagccagtttatccgc
agcaatctgcaggatgccaaatggttgatcaagagtctggaaagccgtaacgatacgcta
ctgcgcgtgagtcgctgtatcgttgaacagcagcaagccttctttgagcaaggtgaagaa
tatatgaaaccgatggtactggccgatatcgcccaggctgtcgaaatgcatgaatcgacg
atatctcgcgtgaccacgcaaaaatacctgcatagtccacgaggcatttttgaactgaag
tatttcttttccagtcacgtcaataccgagggcggcggcgaagcttcctccacggcgatt
cgtgcgctggtgaagaaattaatcgcggcggaaaacccagcgaaaccgttgagcgacagc
aagttaacctctttgctgtcggaacaaggtatcatggtggcacgccgcactgttgcgaag
taccgagagtctttatccattccgccgtcaaaccagcgtaaacaactcgtttga
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