Escherichia coli K-12 MDS42: ECMDS42_2949
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Entry
ECMDS42_2949 CDS
T02541
Symbol
gadW
Name
(GenBank) DNA-binding transcriptional activator
KO
K21906
AraC family transcriptional regulator, glutamate-dependent acid resistance regulator
Organism
ecok
Escherichia coli K-12 MDS42
Brite
KEGG Orthology (KO) [BR:
ecok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecok03000
]
ECMDS42_2949 (gadW)
Transcription factors [BR:
ecok03000
]
Prokaryotic type
Helix-turn-helix
AraC family
ECMDS42_2949 (gadW)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
BAL40114
LinkDB
All DBs
Position
complement(3102797..3103525)
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AA seq
242 aa
AA seq
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MTHVCSVILIRRSFDIYHEQQKISLHNESILLLEKNLADDFAFCSPDTRRLDIDELTVCH
YLQNIRQLPRNLGLHSKDRLLINQSPPMPLVTAIFDSFNESGVNSPILSNMLYLSCLSMF
SHKKELIPLLFNSISTVSGKVERLISFDIAKRWYLRDIAERMYTSESLIKKKLQDENTCF
SKILLASRMSMARRLLELRQIPLHTIAEKCGYSSTSYFINTFRQYYGVTPHQFAQHSPGT
FS
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgactcatgtctgctcggtgatcctcattcgtcgttcattcgatatttatcatgaacag
caaaaaatatcgctgcataacgagagtattctgctgctggagaaaaatttggcagacgat
tttgcgttttgttcaccggatacgcgacgactggatatcgatgagctgacagtttgccat
tacttacaaaatattcgtcagctaccacgcaatttagggttacacagcaaagaccgtttg
ttaattaaccagtcaccccccatgccgctggtgacggcgatttttgatagcttcaatgaa
tccggggtaaattcaccgatactgagcaatatgctctacctttcctgtttatcgatgttt
tctcataagaaagaactgatccccttacttttcaatagcatcagcactgtttcaggaaaa
gttgaacgccttattagctttgatatcgccaaacgttggtatctgcgcgatatcgcggaa
agaatgtataccagcgagagtctaatcaaaaaaaagttgcaggatgaaaatacctgtttc
agtaaaatattactcgcctccaggatgtcgatggccagacgattactcgagttacgtcaa
attcctctgcatactattgcggaaaaatgtggctatagcagtacatcgtactttataaac
acatttcgacaatattatggtgtaacgccacatcagtttgcgcaacattcgccaggtacc
ttttcctga
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