Escherichia coli O145 H28 RM13514 (EHEC): ECRM13514_0352
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Entry
ECRM13514_0352 CDS
T03010
Name
(GenBank) Putative ATP-binding component of a transport system
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
ecoo
Escherichia coli O145:H28 RM13514 (EHEC)
Pathway
ecoo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ecoo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ECRM13514_0352
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecoo02000
]
ECRM13514_0352
02044 Secretion system [BR:
ecoo02044
]
ECRM13514_0352
Transporters [BR:
ecoo02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
ECRM13514_0352
Secretion system [BR:
ecoo02044
]
Type I secretion system
Adhesin protein transporter
ECRM13514_0352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
SMC_N
AAA_13
AAA_29
Peptidase_C39
Pex24p
AAA_23
MMR_HSR1
Dynamin_N
RsgA_GTPase
nSTAND3
NACHT
ATP-synt_ab
Motif
Other DBs
NCBI-ProteinID:
AHG07047
LinkDB
All DBs
Position
complement(365192..367354)
Genome browser
AA seq
720 aa
AA seq
DB search
MKKNAQSVEAWLEAMIAVARYYRLDFSQENVRATVNWERDSKREELLTDMARQLGMGLRL
VEFSADSLNPWRLPLIAVFDNQQIGVITRRDNHDNISVQFSGDEGLETTLNVADVEDKIV
ELALLRPLSAIPDARVDDYIRPYQANWFWNLSLKDWRRYGDIMLASLVANVLALAAMIFS
MQVYDRVVPAQSYPTLWVLFAGVMMAILFEFCMRMVRTHLSDVIGKRADLRISDRVFGHA
LRLKNNVRSKSTGSFISQIRELESVRELITSTTIGAVADLPFFLLFVFILWMIGGWLVLV
VLLALPLLVIPGLLVQRPLARLANEGMRESAVRNATLVEAVQSIEDIKLLRAEQRFQNQW
NHTNDVASSISMKQRFLTGLLLTWTQEVQSIVYVVVLLVGCFMVMNGDMTTGALVGTTIL
ASRTIAPLSQISGVLSRWQQAKVARNGLDELMKRPVDQPEHGKLVHKAVLHGNYQFSNAI
FYYDEEEKIADVAIGKLNIQAGEKIAILGRNGAGKSTLLQMLAGMRIAQQGQVLLDNISI
GQLDPADLRRDMGLLSQTGRLFFGSLRENLTMGMPEASDEDIERALTLSGALPFVQKQKN
GLNYMIQEGGFGLSGGQRQTLLLARLLISQPNIVLLDDPSASLDEMAEAYLIEQLKQWIG
HRTLVIATHRTAMLQLVDRIIVMDQGRIVMDGAKEAILREQGEPTARRVVLQEKNKGSAA
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaatgcccagtccgtggaagcctggctggaggcgatgatcgccgtggcgcgc
tattaccgccttgatttttctcaggagaatgtgcgcgcgaccgtcaactgggagcgcgac
agtaagcgggaggagttactcaccgacatggcgcggcagttgggaatggggttacggctg
gtggagttttccgccgattcgcttaacccgtggcggttgccgttgatcgcggtatttgat
aatcagcagattggcgtaatcacccgccgcgacaatcatgacaatatcagcgttcagttc
agcggcgacgaagggctggaaaccacgcttaacgtcgcggatgttgaggataaaatcgtt
gaactggcgctgttgcgccctctcagcgccatccctgacgcgcgggtagatgattacatt
cgtccgtatcaggcgaactggttctggaatctctcgctgaaagactggcggcgctacggc
gatattatgctggcctcgctggtggcgaacgtgctggcgctggcggcgatgattttctcg
atgcaggtttacgaccgggtggttccggcgcaatcgtacccgacgctatgggtgctgttc
gccggggtgatgatggcgatcctgtttgagttctgtatgcgcatggtgcgcacgcatctt
tctgatgtgatcggcaagcgggcggatctgcgtatttcggatcgcgtttttggtcacgca
ttacggctgaaaaacaacgtgcgatcgaaatccaccggatcgtttatctcgcagatccgc
gaactggaatcagtgcgggagcttattacgtccaccaccatcggcgcggtggcggacctg
ccgttcttcctgctgtttgtttttattctgtggatgattggcggctggctggtgctggtg
gttttgctagcgctgccgttgctggtgatccccggcctgctggtgcaacgcccgctggcg
cggctggcgaacgaaggaatgcgcgagtcagcggtacgcaacgctacgctggtggaagcc
gtgcagtcgattgaagatattaaactgctgcgcgctgaacagcgttttcagaatcagtgg
aatcacactaacgacgtggcctcgtccatcagcatgaagcaacgttttctcaccgggcta
ctgctcacctggacccaggaagtgcaatccatcgtctacgtcgtggtgctgttggtgggc
tgctttatggtgatgaacggcgacatgaccaccggcgcactggttgggacgacgatcctg
gcttcgcgcaccatcgcgccgctgtcgcagatatccggcgtgctctcgcgctggcagcag
gcgaaagtagcacgtaacggccttgatgaactgatgaagcgccccgtggatcagccggaa
cacggcaaactggtgcataaagcggtgctgcacggtaattatcagttcagcaacgctatc
ttttattacgacgaagaagagaagattgccgatgtagcgattggcaaactcaacattcag
gctggtgagaaaatcgccattctcgggcgcaacggcgcgggtaaatcgacgctactgcaa
atgctcgccggaatgcgtatcgcccagcaggggcaggtgttgctggataacatcagtatc
gggcagcttgatccggcagatctgcggcgagacatggggctactcagccagaccgggcga
ctgttctttggttcgctgcgggaaaacctcaccatggggatgccggaagccagcgatgaa
gatatcgaacgcgcgttaaccctcagcggagcgctgccctttgtgcagaagcagaaaaac
ggcctcaactacatgattcaggaagggggatttggcctctctggcggccagcggcaaacg
ctgctgctggcgcggcttctcatctctcagccgaatatcgtcctgctcgacgatcccagc
gcctcgctggacgaaatggcggaagcgtatttaatcgaacaactgaaacagtggattggg
catcgcacgctggtcatcgccactcaccgcacggcgatgctgcaactggtggaccgcatt
atcgtgatggatcaggggcggattgtgatggatggcgcgaaagaggccattttgcgtgaa
cagggcgaacccacggcgcgacgggtggtgttgcaggaaaagaataaggggtctgccgca
tga
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