KEGG   Escherichia coli O145 H28 RM13514 (EHEC): ECRM13514_3515
Entry
ECRM13514_3515    CDS       T03010                                 
Symbol
nrdE
Name
(GenBank) Ribonucleotide reductase of class Ib (aerobic), alpha subunit
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
ecoo  Escherichia coli O145:H28 RM13514 (EHEC)
Pathway
ecoo00230  Purine metabolism
ecoo00240  Pyrimidine metabolism
ecoo01100  Metabolic pathways
ecoo01232  Nucleotide metabolism
Module
ecoo_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
ecoo_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:ecoo00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    ECRM13514_3515 (nrdE)
   00240 Pyrimidine metabolism
    ECRM13514_3515 (nrdE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ecoo03400]
    ECRM13514_3515 (nrdE)
Enzymes [BR:ecoo01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     ECRM13514_3515 (nrdE)
DNA repair and recombination proteins [BR:ecoo03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    ECRM13514_3515 (nrdE)
SSDB
Motif
Pfam: Ribonuc_red_lgC RNR_N Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: AHG10179
LinkDB
Position
3421222..3423366
AA seq 714 aa
MATTTAERLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ
QRLNWLVNEGYYDESVLNRYPRDFVITLFAHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK
RYLEDFADRVTMVALTLAQGDETLATQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFL
LRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLED
AFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLA
KENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFE
SGYPYIMYEDTVNRANPIAGRINMSNLCSEILQVNSASEYNENLDYARTGHDISCNLGSL
NIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAR
EGIAYGSPEALDFTNLYFYTITWQALRTSMLLARERGQTFAGFKQSRYASGEYFSQYLQG
NWQPKTAKVGELFARSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATS
SIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQG
LSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL
NT seq 2145 nt   +upstreamnt  +downstreamnt
ttggcaacgacaaccgcagaacgcctgacgcaggaaacgatggattatcacgcgctgaat
gcgatgcttaacctctacgatagcgcaggtcgcattcagttcgataaagaccgccaggcc
gttgacgcctttattgcgacgcatgtgcgtccgaacagtgtgaccttcagtagccagcag
cagcgcctgaactggctggtcaacgaaggttactatgatgaaagcgttcttaatcgctac
cctcgcgactttgtcattacgctgtttgcccacgcacacaccagcggttttcgtttccag
acattcctcggggcatggaagttttacaccagctatacgttgaagacattcgacggtaaa
cgttatctggaagattttgccgatcgagtcacgatggtggcgctgacgctggcacaaggc
gatgaaacactggcgacgcagctcactgatgagatgctgtcaggacgctttcagccagcc
acgccgacattcctcaactgcggtaagcagcagcgcggcgaactggtttcctgttttctg
ctgcgtattgaagacaatatggagtcgattggccgggcggtaaattccgcactacaactg
tcgaaacgcggcggcggcgtggcatttttgctgtcgaatctgcgagaagcgggcgcgcca
attaaacgtattgaaaatcaatcttctggcgtaattccggtgatgaaaatgctggaagac
gcattttcctatgccaaccaactcggcgctcgtcagggggctggtgcagtctatttacat
gctcatcatcccgatattctgcgttttctcgacacgaaacgggaaaatgccgacgaaaaa
atccgcattaaaacactgtcgctgggcgtggtgatcccggatatcactttccatctggca
aaagagaatgcgcagatggcgctgttttcgccttatgacgtagagcgagtttatggcaag
ccgtttgccgatgtggccatcagccaacactatgacgaactggttgccgatgaacgcatt
cgcaaaaaatacctcaacgcccgtgatttcttccagcgactggcagaaatccagtttgag
tctggctatccgtacatcatgtatgaagacacggtaaaccgtgctaaccctatcgccggg
cgcataaatatgagtaatctctgctcagaaattttgcaggttaacagcgcctcagagtat
aacgagaatctcgactatgcccgcacaggccatgatatctcctgcaatttaggttcgttg
aatattgcccacaccatggattcccccgactttgcccgcacggtagagactgccgtacgc
ggtttaacggcggtgtcagatatgagtcatatccgcagcgtgccctccatcgaagccgga
aatgccgcctcgcacgccatcggactggggcagatgaatttacatggttatctggcgagg
gaaggcatcgcttatggttcgccggaagcactggatttcaccaatctctatttctatacc
atcacctggcaagcactgcgtacctcgatgttgctggcgcgcgaacgcggtcaaaccttc
gccgggttcaaacagtcacgctatgccagtggtgaatatttcagccaatatctgcaaggt
aactggcagccgaaaacggcgaaagttggcgaactgtttgcccgcagcggtattacgtta
cctacccgtgagatgtgggcgcaactgcgcgatgacgtgatgcgatacggcatttacaac
cagaatctccaggcggtgccgccaaccggttctatctcttatatcaaccatgctacgtcg
agtattcatccgattgtggcgaaagtagagatacgcaaagagggcaaaacaggacgcgtt
tactaccctgccccatttatgactaacgaaaatctggcgctgtatcaggacgcttacgaa
atcggcgcagaaaagatcatcgacacctacgcggaagcgactcgccatgtcgatcagggg
ctgtcgctgacgctgtttttccccgataccgccaccactcgcgatatcaacaaagcgcag
atttacgcctggcgcaaaggtatcaaaacgctctattacatccgcctgcgtcagatggcg
ctggaaggcactgaaattgaaggctgcgtctcctgtgcactttaa

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