Escherichia coli O81 ED1a (commensal): ECED1_0058
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Entry
ECED1_0058 CDS
T00827
Symbol
hepA
Name
(GenBank) RNA polymerase-associated helicase protein (ATPase and RNA polymerase recycling factor)
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
ecq
Escherichia coli O81 ED1a (commensal)
Brite
KEGG Orthology (KO) [BR:
ecq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecq03021
]
ECED1_0058 (hepA)
Transcription machinery [BR:
ecq03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
ECED1_0058 (hepA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
AAA_34
DUF2482
Flavi_DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAR06281
UniProt:
B7MNR6
LinkDB
All DBs
Position
complement(61164..64070)
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AA seq
968 aa
AA seq
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MPFTLGQRWISDTESELGLGAVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT
ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI
DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG
LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH
DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE
QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL
AGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRN
TRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGD
NATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI
IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDET
EGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAM
NLFDIIGINQDDRGDNIIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWE
HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTP
VRMLLDKNGNNLAAQVEFETFNRQLNAVNRYTGSKLVNAVQQDVHAILQLGEAQIEKSAR
ALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgatacagaaagcgaattgggacttgga
gccgttgtcgcggtggatgcgcgaactgtcactttacttttcccatctactggtgaaaac
cgtctgtacgcacgcagtgattcccccgtgacccgcgtgatgttcaaccctggtgatacc
attaccagccatgacggctggcagatgcaagtcgaagaagtaaaagaagaaaatggcttg
ctgacctatatcggtactcgccttgatactgaagagtccggcgtagccctgcgtgaagtt
ttccttgatagcaaactggtgttcagcaaaccgcaggaccgtctgtttgccgggcagatt
gaccgtatggaccgctttgcgctgcgttatcgcgcgcgtaagtattccagcgaacagttc
cgtatgccgtacagcggcctgcgcggtcagcgtaccagcctgatcccgcaccagctcaac
atcgctcatgatgttggtcgccgccacgcgccgcgcgtcctgctggctgacgaagtgggt
ttagggaaaaccattgaagccgggatgatcctgcatcagcaactgctctctggcgctgct
gaacgtgtgctgattatcgtcccggaaaccttacagcatcagtggctggtagaaatgctg
cgccgtttcaacctgcgctttgcgctatttgatgatgagcgttatgccgaagctcagcac
gatgcttacaacccgttcgacaccgaacagctggtgatttgctcgctggattttgcccgt
cgtagcaaacagcgtctggaacatctctgtgaagccgagtgggacctgctggtggtcgat
gaagcgcatcacctggtgtggagcgaagatgcgccgagccgtgaatatcaggccattgaa
caactggcagagcacgtgccgggcgttctgctgctgaccgcaaccccggaacagctgggg
atggaaagccacttcgcccgtctgcgtctgctggacccgaaccgtttccacgattttgcg
caattcgttgaagagcagaaaaattatcgtccggttgcggacgccgttgccatgctgctg
gctggtaacaaactcagcaatgacgaactgaacatgctcggtgagatgatcggcgagcag
gatatcgagccgctgttgcaagcagcaaacagcgacagcgaagatgcccagagcgcccgt
caggaactggtttcgatgctgatggatcgccacggtaccagccgcgtgctgttccgtaac
acccgtaacggtgtgaaaggcttcccgaaacgcgagctgcacactattaagctgccactg
ccgacgcagtatcagaccgctattaaagtctccggcattatgggcgcacgtaaaagtgcg
gaagatcgcgctcgcgatatgctctatccggagcgtatttatcaggaatttgaaggcgat
aacgccacctggtggaacttcgatccgcgcgttgaatggctgatgggctacctgaccagc
catcgctctcagaaagtgctggtgatctgcgctaaagcggccactgcgctgcaactggag
caggtactgcgcgaacgtgaaggtattcgcgccgcagtgttccacgaaggcatgtcgatt
atcgaacgtgaccgcgctgccgcctggtttgccgaagaagacaccggcgcacaggtactg
ctgtgctcggaaatcggttctgaaggacgtaacttccagttcgccagccacatggtgatg
tttgacctgccattcaacccggatctgctggagcagcgtattggtcgtctggatcgtatc
ggtcaggcgcacgatattcagatccatgtgccttatctggaaaaaacggctcagtcggtg
ctggtgcgctggtatcacgaaggtctggatgcattcgagcacacctgcccgaccggacgc
actatctacgatagcgtgtacaacgatttgattaactatctggcctcgccggatgagacc
gaaggctttgacgatctgatcaaaaactgccgcgagcagcatgaagcgctgaaagcacaa
ctggaacaggggcgtgaccgcctgctggagatccactccaacggtggcgaaaaagcccag
gcactggcagaaagcattgaagagcaggatgacgataccaacctgatcgccttcgccatg
aacctgttcgatattatcggtatcaatcaggacgatcgcggcgacaacataatcgtgctg
acgccgtccgatcatatgctggtgccggacttccctggcctgtcggaagatggaatcacc
atcaccttcgaccgtgaagtggcgctggcgcgtgaagatgcgcagtttattacctgggag
catccgctgatccgcaacggtctggatctgatcctttctggcgataccggtagcagcacg
atttcactgttgaaaaacaaagcgttgccggtaggtacgctgttggtggaactgatttat
gtggttgaagcccaggctccgaagcagttgcagctcaaccgcttcctgccaccgacgccg
gtacgtatgctgctggataaaaacggcaacaacctggcggcgcaggtagagtttgaaacc
tttaaccgccagcttaacgcggttaaccgttacaccggcagcaagctggttaacgccgtg
cagcaggatgttcacgctatccttcagctgggggaagcgcagatcgagaaatctgcccgt
gcattgattgatgcagcgcgtaacgaagccgacgaaaaactgtctgccgagctgtctcgt
ctggaagcgctgcgtgcagttaacccgaacattcgtgacgacgaactgaccgccattgag
agcaaccgtcagcaggtaatggaaagcctggatcaggcaggctggcgtctggatgccctg
cgtttgatcgttgtaacgcatcagtaa
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