Escherichia coli O81 ED1a (commensal): ECED1_3012
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Entry
ECED1_3012 CDS
T00827
Symbol
yfiF
Name
(GenBank) putative methyltransferase
KO
K03214
RNA methyltransferase, TrmH family [EC:2.1.1.-]
Organism
ecq
Escherichia coli O81 ED1a (commensal)
Brite
KEGG Orthology (KO) [BR:
ecq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecq03009
]
ECED1_3012 (yfiF)
03016 Transfer RNA biogenesis [BR:
ecq03016
]
ECED1_3012 (yfiF)
Ribosome biogenesis [BR:
ecq03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ECED1_3012 (yfiF)
Transfer RNA biogenesis [BR:
ecq03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
ECED1_3012 (yfiF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
Motif
Other DBs
NCBI-ProteinID:
CAR09180
UniProt:
B7MYL4
LinkDB
All DBs
Position
complement(2974341..2975378)
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AA seq
345 aa
AA seq
DB search
MNDEMKGKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRADGGRRPARDDKQSQPR
DRKWEESPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALF
QSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKK
RNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAI
RTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEY
EGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNKA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatgaaatgaaaggtaaaagcggcaaggtcaaagtgatgtatgtccgcagtgat
gatgattctgataaacgtacccacaacccgcgtaccgggaaagggggcgggcgtccagga
aaatctcgtgctgacggtggccgtcgccccgcccgcgatgacaaacagagtcagccccgt
gaccgcaagtgggaagagtcgccgtggcgcacagtttcccgcgcgccgggtgatgagacg
ccggaaaaggccgatcacggtggcatcagtggtaaaagttttattgatccggaagtgttg
cgtcgtcagcgtgcggaagaaacccgcgtctacggcgaaaatgcctgtcaggcactgttc
cagagccgtccggaagcgattgttcgcgcctggtttatccagagtgtaacgccgcgtttt
aaagaagccttgcgctggatggcagcaaaccgcaaagcgtaccatgtggtagatgaagcg
gaactgacaaaagcgtcaggcacggaacatcacggcggcgtttgcttcctgatcaaaaag
cgtaacggtacaaccgtgcagcagtgggtaagccaggcaggcgcgcaggattgtgtactg
gcgctggaaaacgaatctaacccgcataacctgggtggcatgatgcgcagctgcgcgcac
ttcggcgtgaaaggcgttgtggtgcaggatgcggcactgctggagtcgggggcggctatc
cgtaccgcagaaggcggcgcagagcacgttcagccgattactggcgacaacattgttaac
gtgctggatgatttccgtcaggcaggttacaccgtagtgaccacttccagcgagcagggg
aaaccgctgttcaaaaccagtctgccagcgaaaatggtactggtgctgggtcaggaatat
gaagggttaccggatgccgcacgcgatccgaacgatttgcgcgtgaagattgatggtact
ggcaacgttgccgggctaaatatctctgttgcaaccggcgttttgcttggtgaatggtgg
cgtcagaataaagcctga
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