Escherichia coli O8 IAI1 (commensal): ECIAI1_2717
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Entry
ECIAI1_2717 CDS
T00828
Symbol
rluD
Name
(GenBank) 23S rRNA pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
ecr
Escherichia coli O8 IAI1 (commensal)
Brite
KEGG Orthology (KO) [BR:
ecr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecr03009
]
ECIAI1_2717 (rluD)
Enzymes [BR:
ecr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
ECIAI1_2717 (rluD)
Ribosome biogenesis [BR:
ecr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ECIAI1_2717 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
TruB_N
Motif
Other DBs
NCBI-ProteinID:
CAQ99544
LinkDB
All DBs
Position
complement(2802097..2803077)
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AA seq
326 aa
AA seq
DB search
MAQRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILDQRVLVNGKVCDKPKEKVL
GGEQVAINAEIEEEARFEPQDIPLDIVYEDEDIIVINKPRDLVVHPGAGNPDGTVLNALL
HYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQRREITREYEAVAIGHMT
AGGTVDEPISRHPTKRTHMAVHPMGKPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHM
AHITHPLVGDPVYGGRPRPPKGASEAFISTLRKFDRQALHATMLRLYHPISGIEMEWHAP
IPQDMVELIEVMRADFEEHKDEVDWL
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcacaacgagtacagctcactgcaacggtgtccgaaaatcaactcggtcaacgctta
gatcaggctttggccgaaatgttcccggattattcacgttcgcgaataaaagaatggatc
ctcgaccagcgcgtgctggtaaacggcaaagtttgtgataagccgaaagaaaaagtattg
ggtggcgagcaggttgccatcaacgctgagattgaagaagaagcgcgttttgaaccgcag
gatatcccgctggatatcgtctatgaagatgaagatatcatcgtcattaataaaccgcgc
gacctggtggtacatcctggcgcgggtaacccggatggcacggtactgaatgcgttgctt
cattactatccgcccattgccgatgtaccacgtgcgggcatcgtccatcgtctggataaa
gacaccactggcctgatggttgtggcaaaaaccgttccggctcagacgcgtttagtcgaa
tctttgcaaaggcgtgaaattactcgtgagtatgaagcggtggcaattggtcatatgacc
gctggcggtacagtagatgaaccaatcagccgccacccgaccaaacgtactcacatggcg
gtgcatccgatgggcaaaccggcggtgactcactatcgcatcatggaacacttccgtgtg
cacacgcgtctgcggttgcgtctggaaactggacgtacgcaccagatccgcgtgcatatg
gcccatatcactcatccgctggtgggcgatccggtttatggtggccgtccgcgtccgcca
aaaggtgcttcggaagcatttatctccacgctgcgtaagtttgaccgccaggcgcttcat
gcaaccatgctgcgtctttatcacccgatctccggcatcgaaatggaatggcatgcgcct
attccacaagatatggtggagctgattgaggtgatgcgcgccgatttcgaagagcataag
gatgaagtggactggttatga
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