Etheostoma cragini (Arkansas darter): 117941809
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Entry
117941809 CDS
T07493
Symbol
tyw1
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecra03016
]
117941809 (tyw1)
Enzymes [BR:
ecra01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
117941809 (tyw1)
Transfer RNA biogenesis [BR:
ecra03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
117941809 (tyw1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Flavodoxin_5
Motif
Other DBs
NCBI-GeneID:
117941809
NCBI-ProteinID:
XP_034722849
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Position
3:26725224..26776353
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AA seq
780 aa
AA seq
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MLISPKYGCTQHQRTLYCNTLIAKMLSFFMIIALCISRVSTLDTKVSQNVHSPSESYLIS
IWQNRLYLYSAAALVFGIWFSLKFIPKKKGLSKDVGPWVYKAVKSNDSPDRDTSVHVSGV
KIFYGSQTGTAKGFAEELSEEVKTLGIPAEVINIKDYDPDDQLADECTNKSVCVFLVATY
TDGQPTENAEWFCKWLEEASTDFRYGKTYLKGLRYAVFGLGNSVYVGHYNTVGKNVDKWL
WMLSGMRIMTRGEGDCNVVKSRNGSIQTDFVAWKVRFLKRLQTLAKGEKKSCSGNCKTGG
SCKNKRKDGQEEEEEEEEEEKEAPQNNSSEEDLIESSSDDEDSSLQDEKHSGSVVDMEDL
GKIMSSAKKEKSKEEGRGDGQMVKLSKLNGGKRIEDDGERREMITPALRGALTKQGYKLI
GSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCMETTPSLACANKCVFCWRHHTNPVG
TEWRWKMDPAEKILQDALEKHESMIRQFRGVPGVKPERYEEGLAVKHCALSLVGEPIMYP
EINTFIRLLHSHRISSFLVTNAQFPQEIRSLVPVTQLYVSVDASTKDSLKKIDRPLFKDF
WPRFLDSLRALGEKRQRTVYRLTLVKAWNVEEMQSYSELIALGQPDFIEVKGVTYCGESS
ASTLTMANVPWHQEVVTFVQQLADMLPQYEIACEHEHSNCLLMAHTKFKVDGEWWTWINY
ERFQELVQAHEESGGKQGFSALDYMAKTPSWALFGASEQGFDPADTRFQRRNKSKDISGC
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcagcccaaaatatggttgcacacaacatcagaggacactgtattgtaataca
ctaattgcaaagatgctgagtttcttcatgattattgctctttgcataagtcgtgtgtct
actttggataccaaagtctcgcagaatgtccacagtcccagtgagagctatctcatatcc
atatggcaaaacagactgtacttgtattcagctgctgcactagtctttgggatctggttc
tcacttaagtttataccgaagaagaaaggtttatccaaagacgtcggcccgtgggtctac
aaagctgtgaagagcaatgacagcccggacagagacacctcggttcatgtgtccggagtt
aaaatcttctacgggtcacaaactggaactgcaaagggttttgcagaagagctgtcggag
gaggtgaagacgttgggtattccagcagaggtgatcaacatcaaagactatgatccagat
gatcaacttgcagatgagtgcaccaacaagtcagtctgcgtatttcttgtggccacctac
actgacggacagcccacagagaacgctgagtggttctgcaagtggttggaggaggcctcc
actgatttcagatacgggaagacctacctcaaaggcctcagatatgctgtgtttggtctt
ggcaactctgtctatgttggccactacaatacagtgggtaaaaatgtggacaagtggctt
tggatgctgagtggcatgcggataatgaccaggggagagggtgactgtaatgtggtgaag
agccgtaatggcagcattcagacagactttgtggcctggaaggtcaggttcctgaagcgc
ctacagaccctggccaagggtgagaagaagagctgcagcgggaactgtaagactggaggc
tcctgtaagaacaagaggaaagacggccaggaggaggaggaggaggaggaggaggaggag
aaggaagctccgcagaataacagctcggaggaggatcttatagagtccagcagtgatgac
gaggactctagcctgcaagatgagaaacactccggttcagtggttgacatggaggatctg
ggcaagatcatgagcagtgccaagaaagaaaagagcaaggaggagggtcgaggagacggc
cagatggtgaagctatccaagttgaacggcgggaagaggattgaagatgacggggagaga
agagagatgatcacccctgcccttagaggggcgctgacaaaacaggggtacaaactaatt
ggaagtcactcaggagtgaagctttgtcgatggaccaagtccatgttgcgagggagagga
ggatgttacaagcacactttctatggtattgagtcccaccggtgcatggagactaccccc
agccttgcctgtgctaacaagtgtgtcttctgctggagacaccacaccaaccccgtgggc
acagagtggcgctggaagatggaccctgctgagaagatcctgcaggatgccttggagaag
cacgagagcatgattcgacagttcagaggtgtccctggagtgaagcccgagcgctatgag
gagggcttggcagtcaagcactgtgccctctccctggtgggtgagccaatcatgtacccc
gaaatcaacaccttcatccgcctcctccactctcatcgcatctccagcttcctggtcacc
aatgcacaattcccacaggaaatcaggagcctggtgccagtcacccagttgtatgttagt
gtggatgccagcaccaaagacagtctgaagaagattgaccgaccactttttaaggacttc
tggccacgcttcctggacagcctcagggccctgggagagaagagacagaggacggtgtat
agactgacgctggtaaaggcctggaatgtggaggagatgcagtcctactcagagctcatt
gctttgggccagccggacttcattgaggtcaagggagtgacgtattgtggagaaagctct
gccagcactctgaccatggctaatgtcccctggcaccaggaagtggtcaccttcgtccag
cagctggctgacatgttgcctcagtatgagatcgcctgcgaacacgagcactccaactgt
ttgctcatggcacataccaagttcaaggtggatggcgagtggtggacatggatcaactac
gagcgtttccaggagctggtccaggctcatgaggagagtgggggaaagcagggcttctcg
gccttggactacatggccaagacgcccagctgggctctgttcggagccagtgagcaaggt
tttgaccccgccgacacacgcttccaacgacgcaacaaaagcaaagacatttcaggatgc
tga
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