Etheostoma cragini (Arkansas darter): 117957814
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Entry
117957814 CDS
T07493
Symbol
tsen54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54 isoform X1
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecra03016
]
117957814 (tsen54)
Transfer RNA biogenesis [BR:
ecra03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
117957814 (tsen54)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
OCIA
Motif
Other DBs
NCBI-GeneID:
117957814
NCBI-ProteinID:
XP_034749750
LinkDB
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Position
15:complement(19093860..19104106)
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AA seq
512 aa
AA seq
DB search
MADINKTELQFYSEILSPSELFAARSRSHKIPVRGPKDFFPDDSDEQRQRLEQSLNEHWS
LVSEERVEKLGNLVKATWIPSEQIVELQSPAGKFWQTMGFSAKGKQFLLPEEALYLMECG
NVQVFYRDLPLSIQDGYERFLSSSTVSLQQYQVFGHLKRLGYVVHRFDPSSEPSSYARQL
NLPQCRDRAGRQLKRKRSASPTPSNTEAQEESTTDRREGAKRGYKGEEEDKLPESHLTMS
PETSSTQTATASSAHKGGDRTWWMTEVLRGQSDQRPVSRTSRWDFSSIAFPDLGSTGCLS
SCLASPDPSLLPGSLTVGVCDIAPWTQKINVRKVKMSLREHKREKDKQRQQLDVNKNREV
QRCRHWAEYKELLARRQGKRKGRPEHLWDREVTPLHDPTQPLPTGELLDKISVIESTNLL
DGASRLKGSDDWRICFNVYQPDSAADFKKSNPGKPYSRMCVCSFDGPVPDLRAIKLLSFQ
SGDIPVVFAVVDYGDISFYTFKDFQLPTDVFP
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcggacataaacaagacagagttacagttctacagtgaaatattaagtccatctgaa
ctgtttgcagcccggtccaggagtcacaagatcccagtcagaggaccgaaggacttcttt
cccgatgactcagacgagcaaagacagcggcttgagcagagtctgaatgagcactggagc
ctcgtatctgaggagagagtggagaagctaggaaacctagtaaaggccacatggattcca
agtgagcagattgtggagcttcagtctccagctggaaagttttggcagacgatgggcttt
tctgccaaaggcaagcagttcctcctccctgaagaggctctctacctgatggagtgtgga
aacgtgcaggtgttttaccgggacctgccgctgtccatccaggacggctacgagaggttt
ctgtcctcgagcacagtgagcctccagcaatatcaggtgttcgggcatttgaagaggctt
ggatatgtggtgcacaggttcgatccaagttcagagccatcctcctatgcgaggcaacta
aacctgcctcagtgtcgtgacagagcaggaagacaactgaagaggaagcgcagcgccagc
ccgacacccagtaacactgaagcacaagaagaatctacaactgacagacgagagggggcc
aaacgcggctacaaaggtgaggaggaggacaaacttcctgagtcacaccttacgatgtcc
ccagagacttcgagcacccagactgccactgctagttcagcacacaaaggcggggacagg
acctggtggatgacggaagttctcaggggccaatcagatcagcggccagtctctaggacc
tcacgctgggacttcagctccatcgctttcccagacctgggatccacggggtgcctttcc
agctgcctggcctccccagacccctctctgctccctggatctttgactgtgggagtctgt
gacattgccccctggactcaaaaaataaacgtgaggaaggtgaagatgtccttaagggag
cacaagagggaaaaagacaagcagaggcagcagttggacgtcaacaaaaacagagaggtt
cagcggtgcagacactgggcagagtacaaggagctgctggcgaggcgccaggggaagcgt
aaaggccgaccagaacacctgtgggacagggaagtcactcctttacatgacccaacacag
ccactccccacaggggagctgctcgataaaatcagtgtgattgaatccacgaatctgctc
gatggggcgtccaggttaaaaggctcagatgactggaggatttgtttcaatgtttaccaa
cccgattcagcggcggacttcaagaagagcaacccggggaaaccttactcccggatgtgt
gtgtgcagtttcgatggccctgtgccagacctgcgagccatcaagctgctgagcttccag
agtggagacatcccggtggtctttgctgtagtggactacggagacatctccttctacacc
ttcaaagacttccagctgcccaccgatgtgttcccctga
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