Escherichia coli O157 H7 Sakai (EHEC): ECs_5005
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Entry
ECs_5005 CDS
T00048
Symbol
rluF
Name
(RefSeq) ribosomal large subunit pseudouridine synthase F
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
ecs
Escherichia coli O157:H7 Sakai (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecs03009
]
ECs_5005 (rluF)
Enzymes [BR:
ecs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
ECs_5005 (rluF)
Ribosome biogenesis [BR:
ecs03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ECs_5005 (rluF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-GeneID:
914336
NCBI-ProteinID:
NP_313032
UniProt:
Q8X4L9
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All DBs
Position
5083873..5084745
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AA seq
290 aa
AA seq
DB search
MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE
PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG
DLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT
LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS
SEAKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccgactcatcagtccgtttaaataaatacatcagcgaaagcggaatttgctca
cgccgcgaagcggatcgctatatcgagcaaggcaatgtgttccttaatggcaagcgagcc
accattggcgatcaggtgaaacccggcgacgttgtgaaagtaaacggtcagttgattgag
cctcgggaagccgaagatttggtacttatcgccctgaacaagcccgtaggcattgtcagc
accaccgaagatggcgagcgcgataacattgtcgatttcgttaaccacagcaaacgcgtg
ttcccgattggccgcctggataaagactcccaggggctgattttcctcaccaatcacggc
gatctggtgaataagatcctccgtgcgggtaacgatcatgagaaagagtatctggtgacg
gtcgataaaccgattaccgatgaatttattcgtggtatgggggcgggggtgccgatcctc
gggacggtgactaaaaagtgcaaagtcaaaaaagaagcgccgtttgtcttccgcattacc
ctggtgcaggggctgaaccgtcagatccggcgcatgtgcgagcatttcggctatgaagtg
aaaaagctggaacgtacgcgcattatgaacgtcagcttaagcggcattccgctgggggag
tggcgcgatttaaccgacgatgagttaatcgacctctttaagctcatcgaaaattcctct
tccgaggcaaaacctaaagcgaaggccaaaccgaaaacagcgggcatcaaacgtccagtc
gttaagatggaaaaaacggcggaaaaaggcggtcgcccggcgtccaacggtaagcgtttt
acctcgccggggcgaaaaaagaaggggcgctaa
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