Ectobacillus sp. JY-23: MUG87_09740
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Entry
MUG87_09740 CDS
T09162
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ecto
Ectobacillus sp. JY-23
Brite
KEGG Orthology (KO) [BR:
ecto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecto03016
]
MUG87_09740 (thpR)
Enzymes [BR:
ecto01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
MUG87_09740 (thpR)
Transfer RNA biogenesis [BR:
ecto03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
MUG87_09740 (thpR)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
UOY94342
LinkDB
All DBs
Position
complement(1887209..1887739)
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AA seq
176 aa
AA seq
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MTNHYFIAIPLPDFVKEELAMWKNKVASTLGFRTWVHQNDYHITLAFLGSAAQALPSLQR
QLSNIRVQKFELSLKGLKTFGVPERPRILWADVTYPPELMSLQVEIHKTCEMTGIELEKR
PYRPHITLARRFSAENAFFPPSYVWKPLSFEVTRVVLYETHMMRIPKYEELFVYHL
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaatcattatttcattgcaattccgttgcctgattttgtaaaggaagaattggca
atgtggaaaaataaagtggctagcacattagggtttcgaacgtgggtgcaccagaatgat
tatcatattacccttgcatttttaggaagtgctgcacaagcgcttccttctttacaacga
cagcttagcaacattcgagtacaaaagtttgaactatcattaaaaggcttaaaaacattt
ggtgtcccggaacgaccgcgtattttatgggctgatgtaacatatcccccagaattgatg
agtttgcaggtagagattcataaaacgtgcgaaatgacgggcattgagcttgaaaagcgt
ccatatcgtccgcatattacgctagctagacgcttttcggcagagaatgcattttttcct
ccctcatatgtttggaagcctttgtcatttgaagttacaagggttgtattgtatgaaacg
catatgatgcgcattcctaaatatgaagagttgtttgtctatcatttataa
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