Escherichia coli APEC O1 (APEC): APECO1_318
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Entry
APECO1_318 CDS
T00425
Name
(GenBank) glycerol metabolism operon regulatory protein
KO
K05880
transcriptional activator for dhaKLM operon
Organism
ecv
Escherichia coli APEC O1 (APEC)
Brite
KEGG Orthology (KO) [BR:
ecv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecv03000
]
APECO1_318
Transcription factors [BR:
ecv03000
]
Prokaryotic type
Other transcription factors
Others
APECO1_318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS
HTH_8
PAS_4
GAF
PAS_8
Xre-like-HTH
AAA_2
PAS_7
AAA
AAA_5
AAA_16
AAA_7
HTH_17
ELMO_ARM
HTH_50
PAS_9
Motif
Other DBs
NCBI-ProteinID:
ABJ00619
UniProt:
A0A0H2YY03
LinkDB
All DBs
Position
1268114..1270042
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AA seq
642 aa
AA seq
DB search
MRDMSGAFNNDGRGISPLIATSWERCNKLMKRETWNVPHQAQGVTFASIYRRKKAMLTLG
QAALEDAWEYMASRECALLILDETACILSRNGDPQTLQQLSTLGFNDGTYCAEGIIGTCA
LSLAAISGQAVKTMADQHFKQALWNWAFCATPLFDSKGRLTGTIALACPVEQTTAADLPL
TLAIAREVGNLLLTDSLLAETNRHLNQLNALLESMDDGVISWDEQGNLQFINAQAARVLR
LDATASQGRAITELLTLPAVLQQAIKQSHPLKHVEATFESQHQFIDAVITLKPIIETQGT
SFILLLHPVEQMRQLMTSQLGKVSHTFAHMPQDDPQTRRLIHFGRQAARSSFPVLLCGEE
GVGKALLSQAIHNESERAAGPYIAVNCELYGDAALAEEFIGGDRTDSENGRLSRLELAHG
GTLFLEKIEYLAVELQSALLQVIKQGVITRLDARRLIPIDVKVIATTTADLAMLVEQNRF
SRQLYYALHAFEITIPPLRMRRGSIPALVNNKLRSLEKRFSTRLKIDDDALARLVSCAWP
GNDFELYSVIENLALSSDNGRIRVSDLPEHLFTEQATDDVSATRLSTSLSFAEVEKEAII
NAAQVTGGRIQEMSALLGIGRTTLWRKMKQHGIDVSQFKRRG
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcgggatatgagtggcgcttttaacaacgatggtcggggcatatctcccttaattgca
acctcctgggagagatgcaataagctgatgaaacgggagacatggaacgtaccacaccag
gcccagggcgtgacatttgcttctatttatcggcgtaagaaagcgatgctgacgctcggg
caggctgcgctggaagatgcctgggaatatatggcatcgcgagagtgtgcgttgcttatc
ctcgatgaaaccgcctgcattctcagccgtaatggcgatccgcaaaccttgcagcaacta
agtacactgggattcaatgacggcacgtattgcgccgagggaattattggtacttgtgcg
ctatcgttagcggctatctctggtcaggccgtgaaaacgatggccgatcaacatttcaaa
caggcactctggaactgggccttttgcgcaacgccgttgtttgacagcaagggccgattg
acgggaacaatagcgctggcgtgtccggttgagcaaactaccgcagctgatttgccgttg
acgttggcaatcgcacgcgaggtcggaaatttactgctgacggacagtttgctcgctgaa
actaaccgtcatttaaatcaacttaatgccctgttagaaagtatggatgatggcgtgatt
agctgggacgagcagggtaatttgcaatttatcaatgcccaggcggcgcgggtcttgcgc
cttgacgcgacggcaagtcagggacgagcaatcactgaactcttaacgttacccgccgta
ttgcaacaagcaataaaacagtcacatccgctcaaacacgtagaagccacctttgaaagt
cagcatcagtttattgatgcggtgataacccttaaaccgataatagaaacgcagggaacc
agctttattttattgctccatcctgtggaacagatgcggcagttaatgaccagtcaatta
ggaaaagtcagccataccttcgctcatatgccacaggacgatccgcaaacccgccgcttg
attcattttggtcgccaggcggcacgcagtagctttcctgtcctgctttgtggagaagag
ggcgtgggcaaggcactgctaagtcaggcaattcataatgaaagcgagcgtgcagcgggg
ccttatatcgccgtcaattgtgagttatatggtgatgcggcgctggcggaagaatttatt
ggtggcgatcgcacggatagtgaaaatggccgtctgagtcggctggaactggcgcacggc
ggcacgctgtttcttgaaaagattgaatatctggcggtggagttacagtctgccttgctt
caggttatcaagcagggggttatcacgcgactggatgcgcggcgtttaatacccattgat
gtcaaagtgattgccacaacgaccgcggacctcgcaatgctggtggaacaaaatcgtttt
agtcgccagctgtattacgcgctgcatgcatttgaaattaccatcccgccactgcgtatg
cggcgtggcagcattccggcgctggtgaataacaaattacgcagccttgaaaaacgcttc
tctacgcggctgaaaattgatgacgatgccctcgctcgcctggtttcctgtgcatggcct
ggcaacgattttgaactttacagcgtcatcgagaatcttgctctgagtagtgataatggg
cgcattcgcgtcagtgatttgccggaacatctgtttaccgagcaggcgacagatgatgtc
agcgccacccgcctttccaccagtctgtcatttgcggaagttgaaaaagaggcaattatt
aacgcagcccaggtcacaggcggtcgcattcaggaaatgtcggctttacttggaatcggc
cgcaccacgctgtggcggaaaatgaagcaacatggcattgatgtgagtcagtttaagcgc
cgtggatag
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