KEGG   Escherichia coli O9 HS (commensal): EcHS_A0851
Entry
EcHS_A0851        CDS       T00591                                 
Name
(GenBank) putative ATP-dependent RNA helicase RhlE
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
ecx  Escherichia coli O9 HS (commensal)
Pathway
ecx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ecx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EcHS_A0851
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ecx03019]
    EcHS_A0851
Enzymes [BR:ecx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     EcHS_A0851
Messenger RNA biogenesis [BR:ecx03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     EcHS_A0851
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 UvrD-helicase UTP25 P-loop_SecA
Other DBs
NCBI-ProteinID: ABV05207
UniProt: A0A7I6H4M7
LinkDB
Position
857476..858840
AA seq 454 aa
MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL
QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM
KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK
RQNLLFSATFSDDIKALAEKLLHNPLEIKVARRNTASDQVTQHVHFVDKKRKRELLSHMI
GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA
SAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAAQ
NT seq 1365 nt   +upstreamnt  +downstreamnt
atgtctttcgattctttgggtttaagccctgatatcctgcgcgccgttgccgagcagggt
taccgtgaacccacccctattcagcagcaggcgatccctgcggtgctggaaggccgcgac
ctgatggctagcgcccagaccggcaccggcaaaacagcgggctttacgctgccgctgttg
caacacctgatcactcgccagccgcacgccaaagggcgtcgtccggtacgtgcgctcatt
cttaccccgacccgtgaactggcggcgcagattggcgaaaacgtccgtgattacagcaaa
tacctgaacattcgttcgctggtggtgtttggtggtgtgagtattaacccgcagatgatg
aaactgcgtggcggcgttgatgtgctggtggcaaccccgggacgtttgctggacctggaa
catcagaatgcagtgaagctggatcaggttgaaatcctcgtcctcgatgaagctgaccgc
atgctcgacatgggctttatccacgatatccgtcgcgtgttaacaaaactacctgcgaag
cgccagaacctgttattctccgcgaccttctctgacgatattaaagccctggcggaaaaa
ctgttgcacaacccgctggaaatcaaagtggcacgccgcaataccgcgtctgatcaggtg
acccagcacgttcactttgtcgataagaaacgcaaacgcgaattgctgtcgcacatgatt
gggaaagggaactggcagcaggtgctggtgtttacccgtaccaaacacggcgctaaccat
ctggctgaacagctcaataaagatggcatccgtagtgcggcgatccacggcaataaatcg
caaggtgcgcgtactcgtgcgctggctgattttaaatcgggcgatattcgtgtactggtg
gcaactgacatcgctgcgcgcggcctggatattgaagagctgccgcacgtcgtcaactat
gaactgccaaacgtacctgaagattatgtccaccgtatcgggcgtaccggtcgtgcggct
gctaccggtgaagcgttgtcgctggtgtgtgttgatgaacacaaactgctgcgtgatatc
gaaaaactgctgaaaaaagagatcccgcgcattgcgattccgggctatgagccggacccg
tcaatcaaagccgaaccgatccagaacggtcgccagcaacgtggcggcggcggtcgtggg
caaggtggtggtcgcggtcaacagcaaccacgccgtggggaaggtggcgcaaaatctgca
agcgcgaaacctgcagaaaaaccgtctcgccgcctcggcgatgccaaaccggcaggcgaa
caacaacgtcgccgccgtccgcgtaaacctgccgctgcgcagtaa

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