Escherichia coli O152 H28 SE11 (commensal): ECSE_1250
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Entry
ECSE_1250 CDS
T00784
Name
(GenBank) conserved hypothetical protein
KO
K05880
transcriptional activator for dhaKLM operon
Organism
ecy
Escherichia coli O152:H28 SE11 (commensal)
Brite
KEGG Orthology (KO) [BR:
ecy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecy03000
]
ECSE_1250
Transcription factors [BR:
ecy03000
]
Prokaryotic type
Other transcription factors
Others
ECSE_1250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS
HTH_8
PAS_4
GAF
PAS_8
AAA_2
Xre-like-HTH
AAA_5
PAS_7
AAA
HTH_17
AAA_16
AAA_7
HTH_50
ELMO_ARM
PAS_9
Motif
Other DBs
NCBI-ProteinID:
BAG76774
UniProt:
A0A979GE15
LinkDB
All DBs
Position
1318800..1320728
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AA seq
642 aa
AA seq
DB search
MRDMSGAFNNDGRGISPLIATSWERCNKLMKRETWNVPHQAQGVTFASIYRRKKAMLTLG
QAALEDAWEYMAPRECALFILDETACILSRNGDPQTLQQLSALGFNDGTYCAEGIIGTCA
LSLAAISGQAVKTMADQHFKQALWNWAFCATPLFDSKGRLTGTIALACPVEQTTAADLPL
TLAIAREVGNLLLTDSLLAETNRHLNQLNALLESMDDGVISWDEQGNLQFINAQAARVLR
LDATASQGRAITELLTLPAVLQQAIKQAHPLKHVEATFESQHQFIDAVITLKPIIETQGT
SFILLLHPVEQMRQLMTSQLGKVSHTFAHMPQDDPQTRRLIHFGRQAARSSFPVLLCGEE
GVGKALLSQAIHNESERAAGPYIAVNCELYGDAALAEEFIGGDRTDNENGRLSRLELAHG
GTLFLEKIEYLAVELQSALLQVIKQGVITRLDARRLIPVDVKVIATTTADLAMLVEQNRF
SRQLYYALHAFEITIPPLRMRRGSIPALVNNKLRSLEKRFSTRLKIDDDALARLVSCAWP
GNDFELYSVIENLALSSDNGRIRVSDLPEHLFTEQATDDVSATRLSTSLSFAEVEKEAII
NAAQVTGGRIQEMSALLGIGRTTLWRKMKQHGIDAGQFKRRV
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcgggatatgagtggcgcttttaacaacgatggtcggggcatatctcccttaattgca
acctcctgggagcgatgcaataagctgatgaaacgggagacatggaacgtaccacatcag
gcccagggcgtgacatttgcttctatttatcggcgtaagaaagcgatgctgacgctcggg
caggctgcgctggaagatgcctgggaatatatggcaccgcgagagtgtgcgctgtttatc
ctcgatgaaaccgcctgcattctcagccgtaatggcgatccgcaaaccttgcagcagcta
agtgcactgggattcaatgacggcacgtattgcgccgagggaattattggtacttgtgcg
ctatcgttagcggctatctctggtcaggccgtgaaaacgatggccgatcaacatttcaaa
caggcactctggaactgggccttttgtgcaacgccgttgtttgacagcaagggccgattg
acgggaacaatagcgctggcgtgtccggttgagcaaactaccgcagctgatttgccgttg
acgttggcaatcgcccgcgaggtcggaaatttactgctgacggacagtttgctcgctgaa
actaaccgtcatttaaatcaacttaatgccctgttagaaagtatggatgatggcgtgatt
agctgggacgagcagggtaatttgcaatttattaatgcccaggcggcgcgggtcttgcgc
cttgacgcgacggcaagtcagggaagggcaatcactgaactcttaacgttacccgccgta
ttgcaacaagcaataaaacaggcacatccgctcaaacacgtagaagcaacctttgaaagt
cagcatcagtttattgatgcggtgataacccttaaaccgataatagaaacgcagggaacc
agctttattttgttgctccatcctgtggaacagatgcggcagttgatgaccagtcaatta
ggaaaagtcagccataccttcgctcatatgccacaggacgatccgcaaacccgccgcttg
attcattttggtcgccaggcggcgcgcagtagctttcctgtcctgctttgtggagaagag
ggcgtgggaaaggcactgctaagtcaggcaattcataatgaaagcgagcgtgctgcaggt
ccttatatcgccgtcaattgtgagttatatggtgatgcggcgctggcggaagaatttatt
ggtggcgatcgcacggacaatgaaaatggccgtctgagtcggctggaactggcacacggc
ggcacgctgtttcttgaaaagattgaatatctggcggtggagttacagtctgctttgctt
caggttatcaagcagggtgttatcacgcgactggatgcgcggcgtttaataccagttgat
gtcaaagtgattgccacaacgaccgcggacctcgcaatgctggtggaacaaaatcgtttt
agtcgccagctgtattacgcgttgcatgcatttgaaattaccatcccgcctctgcgtatg
cggcgtggcagcattccggcgctggtgaataacaaattacgcagtcttgaaaaacgcttc
tctacgcggctgaaaattgatgacgatgccctcgctcgcctggtttcctgtgcatggcct
ggcaacgattttgaactttacagcgtcatcgagaatcttgctctgagtagtgataatggg
cgcattcgcgtcagtgatttgccggaacatctgtttaccgagcaggcaacagatgatgtc
agcgccacacgcctttccaccagtctgtcatttgcggaagttgaaaaagaggcaattatt
aacgcagcccaggtcacaggcggtcgcattcaggaaatgtcggctttacttggaatcggc
cgcactacgctgtggcggaaaatgaagcaacatggcattgatgcagggcagtttaagcgc
cgggtatga
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